RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C1orf52Q8N6N3 182 aaKnown RBP24.11■■□□□ 1.45
SSBP3-202ENST00000357475 TTC29Q8NA56 475 aaPredicted RBP24.11■■□□□ 1.45
SSBP3-202ENST00000357475 GAL3ST3Q96A11 431 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 TUBGCP3Q96CW5 907 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 TRIM55Q9BYV6 548 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 PRDM7Q9NQW5 492 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 ZNF860A6NHJ4 632 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 C9orf172C9J069 976 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TXNDC9O14530 226 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 FOXS1O43638 330 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 EEDO75530 441 aaKnown RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 RSL1D1O76021 490 aaKnown RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 SPINK2P20155 84 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 BSGP35613 385 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 KIAA0040Q15053 153 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 DEFB134Q4QY38 66 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 RFTN2Q52LD8 501 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TMEM35AQ53FP2 167 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TTLL10Q6ZVT0 673 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 MTERF4Q7Z6M4 381 aaKnown RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 METTL4Q8N3J2 472 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 OR9A4Q8NGU2 314 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 OR8K5Q8NH50 307 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 CHTF18Q8WVB6 975 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 MAELQ96JY0 434 aaKnown RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 QRFPRQ96P65 431 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TMEM184BQ9Y519 407 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 A0A0A6YYC8 382 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 A0A0G2JND7 137 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TRPC5OSA6NMA1 111 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 I3L1I5 382 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 KLHL18O94889 574 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 PRR35P0CG20 571 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 PRPH2P23942 346 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 RAP1GDS1P52306 607 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 RAE1P78406 368 aaKnown RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 BTN3A2P78410 334 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 AP5B1Q2VPB7 878 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 C1orf189Q5VU69 101 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 LARP4Q71RC2 724 aaKnown RBP eCLIP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 COMMD6Q7Z4G1 85 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-202ENST00000357475 RGMAQ96B86 450 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 TAAR9Q96RI9 348 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 EPN3Q9H201 632 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 LRTM1Q9HBL6 345 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 FOXJ2Q9P0K8 574 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 KLK13Q9UKR3 277 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 NAALAD2Q9Y3Q0 740 aa24.1■■□□□ 1.45
SSBP3-202ENST00000357475 SGK494L7N484 410 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 SEMA3DO95025 777 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 TNFSF15O95150 251 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 ALOX12P18054 663 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 ITGAXP20702 1163 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 CERS1P27544 350 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 RPL38P63173 70 aaKnown RBP24.09■■□□□ 1.45
SSBP3-202ENST00000357475 GABREP78334 506 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 OLR1P78380 273 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 C6orf136Q5SQH8 315 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 TRIM40Q6P9F5 258 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 C11orf24Q96F05 449 aaPredicted RBP24.09■■□□□ 1.45
SSBP3-202ENST00000357475 CCT7Q99832 543 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 ELAC2Q9BQ52 826 aaKnown RBP24.09■■□□□ 1.45
SSBP3-202ENST00000357475 NDC1Q9BTX1 674 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 EBPLQ9BY08 206 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 ACTR5Q9H9F9 607 aaPredicted RBP24.09■■□□□ 1.45
SSBP3-202ENST00000357475 C1orf109Q9NX04 203 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 POLR3HQ9Y535 204 aaPredicted RBP24.09■■□□□ 1.45
SSBP3-202ENST00000357475 SLC22A7Q9Y694 548 aa24.09■■□□□ 1.45
SSBP3-202ENST00000357475 SDK2Q58EX2 2172 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 NPIPB8E9PQR5 432 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 SEC22BO75396 215 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 TROVE2P10155 538 aaKnown RBP eCLIP24.08■■□□□ 1.45
SSBP3-202ENST00000357475 ALAS2P22557 587 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 ID4P47928 161 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 CAMK2BQ13554 666 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 DCAF12Q5T6F0 453 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 GARNL3Q5VVW2 1013 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 OR4C11Q6IEV9 310 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 CEACAM20Q6UY09 585 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 ABHD13Q7L211 337 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 BPHLQ86WA6 291 aaPredicted RBP24.08■■□□□ 1.45
SSBP3-202ENST00000357475 OR5T3Q8NGG3 340 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 KCNC2Q96PR1 638 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 C1orf50Q9BV19 199 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 TMEM120AQ9BXJ8 343 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 RIC8BQ9NVN3 520 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 NDOR1Q9UHB4 597 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 MAU2Q9Y6X3 613 aa24.08■■□□□ 1.45
SSBP3-202ENST00000357475 SCN2AQ99250 2005 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 AKAP13Q12802 2813 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 TEX51A0A1B0GUA7 166 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 GALR3O60755 368 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-202ENST00000357475 KIAA0754O94854 1291 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 KLK1P06870 262 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 ATP5A1P25705 553 aaKnown RBP24.07■■□□□ 1.44
SSBP3-202ENST00000357475 HOXD11P31277 338 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-202ENST00000357475 SSR2P43308 183 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 EMP3P54852 163 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms