RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ACTR1BP42025 376 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 MAP2K3P46734 347 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 STT3AP46977 705 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ACTR1AP61163 376 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 PRRT2Q7Z6L0 340 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 SLC44A3Q8N4M1 653 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 LMO3Q8TAP4 145 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 TSGA13Q96PP4 275 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SOX17Q9H6I2 414 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 C13orf42A0A1B0GVH6 325 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 POP7O75817 140 aaKnown RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 HSD11B1P28845 292 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 S100A10P60903 97 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 ARHGAP1Q07960 439 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 MS4A13Q5J8X5 152 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ZSWIM9Q86XI8 627 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 BORCS6Q96GS4 357 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 RIMS1Q86UR5 1692 aaKnown RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 A0A1B0GVC2 190 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SLC9A3P48764 834 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 AGTR2P50052 363 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 BLKP51451 505 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 NRG3P56975 720 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 C10orf62Q5T681 223 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 DGLUCYQ7Z3D6 616 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 AMIGO1Q86WK6 493 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 GID4Q8IVV7 300 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PRSS58Q8IYP2 241 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PEX13Q92968 403 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ZNF471Q9BX82 626 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 XKR8Q9H6D3 395 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 REEP4Q9H6H4 257 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 DLGAP4Q9Y2H0 992 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ZNF451Q9Y4E5 1061 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ARVCFO00192 962 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 IL7P13232 177 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 RFC2P35250 354 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 KCNQ1P51787 676 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PDX1P52945 283 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 VMACQ2NL98 169 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SMOQ99835 787 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 ELOVL2Q9NXB9 296 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 UBQLN2Q9UHD9 624 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 CLCA3PQ9Y6N3 262 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 EEDO75530 441 aaKnown RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 ANXA3P12429 323 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 CLCNKAP51800 687 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SAMD12Q8N8I0 201 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 THEM6Q8WUY1 208 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 TFGQ92734 400 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 FCRL3Q96P31 734 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 TMEM246Q9BRR3 403 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SPATA9Q9BWV2 254 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 TAS2R9Q9NYW1 312 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 KLHL33A6NCF5 533 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 AOC2O75106 756 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 MT-ND2P03891 347 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 TCEA1P23193 301 aaKnown RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 TRAM1Q15629 374 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 HSD17B12Q53GQ0 312 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 LRRC66Q68CR7 880 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 OSTM1Q86WC4 334 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 NEIL3Q8TAT5 605 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CCDC120Q96HB5 630 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 DGAT2Q96PD7 388 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 DOHHQ9BU89 302 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 Q9N2J8 555 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 ABCD2Q9UBJ2 740 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 CD1DP15813 335 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CELP19835 753 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 MAGEA8P43361 318 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 GRB7Q14451 532 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 ASRGL1Q7L266 308 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 FOXRED2Q8IWF2 684 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 CHCHD4Q8N4Q1 142 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 RASGEF1AQ8N9B8 481 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 GALNT6Q8NCL4 622 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 AIG1Q9NVV5 245 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 SH2B3Q9UQQ2 575 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 NUAK1O60285 661 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 OR1E2P47887 323 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 SP2Q02086 613 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 NOXRED1Q6NXP6 359 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 ANKRD13BQ86YJ7 626 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 DBF4BQ8NFT6 615 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 FCAMRQ8WWV6 532 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 JSRP1Q96MG2 331 aaPredicted RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 BEX2Q9BXY8 128 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 BEX1Q9HBH7 125 aa14.34□□□□□ -0.11
CHD4-201ENST00000357008 C14orf166Q9Y224 244 aaKnown RBP14.34□□□□□ -0.11
CHD4-201ENST00000357008 UQCRC2P22695 453 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms