RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TBC1D13Q9NVG8 400 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 MARCH5Q9NX47 278 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 CCDC167Q9P0B6 97 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 ZNF69Q9UC07 566 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 RUVBL1Q9Y265 456 aaKnown RBP10.45□□□□□ -0.74
SND1-201ENST00000354725 INSL6Q9Y581 213 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 PCDHB7Q9Y5E2 793 aa10.45□□□□□ -0.74
SND1-201ENST00000354725 GPR171O14626 319 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 KLK8O60259 260 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SRP72O76094 671 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 ITGB6P18564 788 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CSKP41240 450 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CAPZA1P52907 286 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ADARB1P78563 741 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 TAP2Q03519 686 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ZNF91Q05481 1191 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 GRB7Q14451 532 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ZNF169Q14929 603 aaPredicted RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 PCGF3Q3KNV8 242 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CYBRD1Q53TN4 286 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 LCN1P1Q5VSP4 162 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 TIGD7Q6NT04 549 aaPredicted RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 ZNF549Q6P9A3 640 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SEZ6L2Q6UXD5 910 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 TFAP2EQ6VUC0 442 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 RPS27LQ71UM5 84 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 R3HCC1LQ7Z5L2 792 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 COMMD7Q86VX2 200 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 GPALPP1Q8IXQ4 340 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ZNF454Q8N9F8 522 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SLC37A3Q8NCC5 494 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 NAXEQ8NCW5 288 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 NDNFQ8TB73 568 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 PRRX2Q99811 253 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ESRP2Q9H6T0 727 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 LOC285095A0A1B0GVY8 99 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 FAM92AA1XBS5 289 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CCDC182A6NF36 153 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 GPR37O15354 613 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 HS6ST1O60243 411 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 EIF1BO60739 113 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 MTX2O75431 263 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 LDOC1O95751 146 aaPredicted RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 ATXN1LP0C7T5 689 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 TUBG1P23258 451 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 CHAF1BQ13112 559 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 KCNC3Q14003 757 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CSHL1Q14406 222 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 XKR7Q5GH72 579 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SNX20Q7Z614 316 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ADGRG3Q86Y34 549 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 GPR65Q8IYL9 337 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 UMODL1-AS1Q8N2C9 162 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ATPAF2Q8N5M1 289 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 RTL3Q8N8U3 475 aaKnown RBP10.44□□□□□ -0.74
SND1-201ENST00000354725 OR10T2Q8NGX3 314 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 CYGBQ8WWM9 190 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.44□□□□□ -0.746e-8■■■■■ 56.6
SND1-201ENST00000354725 TMEM125Q96AQ2 219 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 TSPAN17Q96FV3 270 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ATOH8Q96SQ7 321 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 TUBG2Q9NRH3 451 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 SLC23A1Q9UHI7 598 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 NDUFAF1Q9Y375 327 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 ASB4Q9Y574 426 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 GPR45Q9Y5Y3 372 aa10.44□□□□□ -0.74
SND1-201ENST00000354725 FAM221AA4D161 298 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 ARGFXA6NJG6 315 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 LDB2O43679 373 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 OXTRP30559 389 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 GZMKP49863 264 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 RCAN2Q14206 197 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 UPP1Q16831 310 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 YOD1Q5VVQ6 348 aaPredicted RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 RAP1GAP2Q684P5 730 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 ZNF517Q6ZMY9 492 aaPredicted RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 PPP1R35Q8TAP8 253 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 DYNC2LI1Q8TCX1 351 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 NPAS1Q99742 590 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 TRIM54Q9BYV2 358 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 PRRG3Q9BZD7 231 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 FBRSL1Q9HCM7 1045 aaKnown RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 GTSE1Q9NYZ3 720 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 WWOXQ9NZC7 414 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 ZFR2Q9UPR6 939 aaKnown RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 TNPO3Q9Y5L0 923 aaKnown RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 OAS3Q9Y6K5 1087 aaKnown RBP10.43□□□□□ -0.74
SND1-201ENST00000354725 DENND4AQ7Z401 1863 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 IGLV3-10A0A075B6K4 115 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 SAC3D1A6NKF1 404 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 C2orf74A8MZ97 194 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 E5RI56 91 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 TMEM189-UBE2V1I3L0A0 370 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 TNFRSF21O75509 655 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 GPIP06744 558 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 DHCR24Q15392 516 aa10.43□□□□□ -0.74
SND1-201ENST00000354725 ADPRMQ3LIE5 342 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms