RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 HHATQ5VTY9 493 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TMEM200BQ69YZ2 307 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TRIM68Q6AZZ1 485 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 DHRS4L2Q6PKH6 230 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 C19orf48Q6RUI8 117 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SLC16A12Q6ZSM3 486 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 RBM23Q86U06 439 aaKnown RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 ITIH5Q86UX2 942 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SERPINA9Q86WD7 417 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SNX32Q86XE0 403 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SCN4BQ8IWT1 228 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 OR2AP1Q8NGE2 309 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 CREB3L4Q8TEY5 395 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 OSCP1Q8WVF1 389 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TESCQ96BS2 214 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 MIEF2Q96C03 454 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 COQ8BQ96D53 544 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 ZNF641Q96N77 438 aaPredicted RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 RPRD1AQ96P16 312 aaPredicted RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 CATSPER2Q96P56 530 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 CCDC77Q9BR77 488 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TRMOQ9BU70 441 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 HTATIP2Q9BUP3 242 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TEX101Q9BY14 249 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 ALOXE3Q9BYJ1 711 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 ANKRD60Q9BZ19 345 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SHCBP1LQ9BZQ2 653 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 TASP1Q9H6P5 420 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GORASP2Q9H8Y8 452 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 IL21RQ9HBE5 538 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 DLL4Q9NR61 685 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SIRT3Q9NTG7 399 aaPredicted RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 FBXO34Q9NWN3 711 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 SMPD4Q9NXE4 827 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GRHPRQ9UBQ7 328 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 EIF2B4Q9UI10 523 aaKnown RBP2.22□□□□□ -2.05
VPS54-202ENST00000354504 ITM2BQ9Y287 266 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 GPR52Q9Y2T5 361 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 COMMD10Q9Y6G5 202 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 CEPT1Q9Y6K0 416 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 CRYBG3Q68DQ2 2970 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 NINQ8N4C6 2090 aa2.22□□□□□ -2.05
VPS54-202ENST00000354504 A0A1W2PP18 115 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ARHGAP10A1A4S6 786 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 OR14I1A6ND48 311 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 AQP12BA6NM10 295 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ARHGEF33A8MVX0 844 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 C9JVG2 144 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 E9PLN8 166 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 F5H5T6 163 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 CAPN9O14815 690 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 TNFRSF6BO95407 300 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 PDYNP01213 254 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 IGLV3-19P01714 112 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 THY1P04216 161 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 MPC1LP0DKB6 136 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 SMIM10L1P0DMW3 83 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 MYF5P13349 255 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 PKMP14618 531 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 NPPBP16860 134 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ZNF8P17098 575 aaPredicted RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 APEX1P27695 318 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 TEAD1P28347 426 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 GDF5P43026 501 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 RPS16P62249 146 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 UBE3AQ05086 875 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 FOXM1Q08050 763 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 DMPKQ09013 629 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 FASTKQ14296 549 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 SQLEQ14534 574 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 UGP2Q16851 508 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ADPRMQ3LIE5 342 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 SPATS1Q496A3 300 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 INTS11Q5TA45 600 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 SEL1L3Q68CR1 1132 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 GRAMD4Q6IC98 578 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 CAPRIN2Q6IMN6 1127 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 KIAA1161Q6NSJ0 714 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 NANOGP8Q6NSW7 305 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 TPRG1Q6ZUI0 275 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 GLT6D1Q7Z4J2 308 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 BMP8AQ7Z5Y6 402 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 KCTD20Q7Z5Y7 419 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 CEP57Q86XR8 500 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 SYT12Q8IV01 421 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 DEFB107AQ8IZN7 70 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 CHCHD4Q8N4Q1 142 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 KRTCAP2Q8N6L1 136 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 PTGR2Q8N8N7 351 aaPredicted RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 LMNTD1Q8N9Z9 388 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 HJURPQ8NCD3 748 aaPredicted RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 OR6K2Q8NGY2 324 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 PHF10Q8WUB8 498 aaKnown RBP2.21□□□□□ -2.05
VPS54-202ENST00000354504 FGF14Q92915 247 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ATP6V1E2Q96A05 226 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 RGMAQ96B86 450 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ZNF524Q96C55 264 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 ROPN1LQ96C74 230 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 LRRC58Q96CX6 371 aa2.21□□□□□ -2.05
VPS54-202ENST00000354504 C1GALT1C1Q96EU7 318 aa2.21□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms