RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 HS6ST3Q8IZP7 471 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 OR9Q2Q8NGE9 314 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.54■■□□□ 1.368e-8■■■■■ 32.7
CPNE1-202ENST00000352393 UTP15Q8TED0 518 aaKnown RBP23.54■■□□□ 1.36
CPNE1-202ENST00000352393 FAM83DQ9H4H8 585 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 QPCTLQ9NXS2 382 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 DUSP12Q9UNI6 340 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 IFT52Q9Y366 437 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 KLK4Q9Y5K2 254 aa23.54■■□□□ 1.36
CPNE1-202ENST00000352393 CFAP20Q9Y6A4 193 aaKnown RBP23.54■■□□□ 1.36
CPNE1-202ENST00000352393 A0A1W2PQ67 120 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 M0R129 80 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 GABRR2P28476 465 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 ETV6P41212 452 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 CRISP3P54108 245 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 CASP9P55211 416 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 EEF1A2Q05639 463 aaKnown RBP23.53■■□□□ 1.36
CPNE1-202ENST00000352393 ZNF648Q5T619 568 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-202ENST00000352393 GAREM2Q75VX8 874 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 OR4K1Q8NGD4 311 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 NFKBIDQ8NI38 313 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 TCF25Q9BQ70 676 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 SLC35A5Q9BS91 424 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 TMEM38AQ9H6F2 299 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 REEP4Q9H6H4 257 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 IMPAD1Q9NX62 359 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 PEX16Q9Y5Y5 336 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 SNPHO15079 494 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 CTSAP10619 480 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 ZNF30P17039 623 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 ITGA2P17301 1181 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 SYTL3Q4VX76 610 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 C9orf43Q8TAL5 461 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-202ENST00000352393 Q96MT0 163 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 SAMD11Q96NU1 681 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 CHCHD6Q9BRQ6 235 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 ATP11BQ9Y2G3 1177 aa23.53■■□□□ 1.36
CPNE1-202ENST00000352393 PLK4O00444 970 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 NPC1O15118 1278 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 C6orf47O95873 294 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 SLC16A8O95907 504 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 CATP04040 527 aaKnown RBP23.52■■□□□ 1.36
CPNE1-202ENST00000352393 EIF2S1P05198 315 aaKnown RBP23.52■■□□□ 1.36
CPNE1-202ENST00000352393 XCR1P46094 333 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 PREPP48147 710 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 ZNF763Q0D2J5 394 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 C19orf48Q6RUI8 117 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 Q6ZVU0 165 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 B3GNT7Q8NFL0 401 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 SCLYQ96I15 445 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 PKP4Q99569 1192 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 CTRCQ99895 268 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 CDCA4Q9BXL8 241 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 MS4A12Q9NXJ0 267 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 TAS2R16Q9NYV7 291 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 SLC25A13Q9UJS0 675 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 SLC6A14Q9UN76 642 aa23.52■■□□□ 1.36
CPNE1-202ENST00000352393 FADS2P1A8MWK0 482 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 TSPAN6O43657 245 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ALDH1A1P00352 501 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 VIPR1P32241 457 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 LRIT3Q3SXY7 679 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 GDPD4Q6W3E5 623 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 SLCO4C1Q6ZQN7 724 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 METTL4Q8N3J2 472 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 GEMIN6Q8WXD5 167 aaKnown RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 MRPS31Q92665 395 aaKnown RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 FAM129BQ96TA1 746 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 C1GALT1Q9NS00 363 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ACER3Q9NUN7 267 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 SRRDQ9UH36 339 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 POU2F3Q9UKI9 436 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 TSC22D4Q9Y3Q8 395 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 J3KTA2 159 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 MED26O95402 600 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ADRA2AP08913 450 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 CBLP22681 906 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 PNLIPRP1P54315 467 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 POLR2LP62875 67 aaKnown RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 PDE7AQ13946 482 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 DEPDC1Q5TB30 811 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 DESI1Q6ICB0 168 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 MED27Q6P2C8 311 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 Q6ZVL8 140 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 OTOP2Q7RTS6 562 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 HEATR4Q86WZ0 1026 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 RAVER1Q8IY67 606 aaKnown RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 SYTL1Q8IYJ3 562 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 OXR1Q8N573 874 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 LILRA3Q8N6C8 439 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 CHAC2Q8WUX2 184 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 AUTS2Q8WXX7 1259 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 NEIL2Q969S2 332 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 TMEM159Q96B96 161 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 PIP5K1AQ99755 562 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 EHD1Q9H4M9 534 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF556Q9HAH1 456 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ACSL6Q9UKU0 697 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 ABT1Q9ULW3 272 aaKnown RBP23.51■■□□□ 1.35
CPNE1-202ENST00000352393 PCDHGB6Q9Y5F9 930 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms