RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZDHHC5Q9C0B5 715 aa13.34□□□□□ -0.27
TRIM4-201ENST00000349062 CTPS2Q9NRF8 586 aa13.34□□□□□ -0.27
TRIM4-201ENST00000349062 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
TRIM4-201ENST00000349062 PDP1Q9P0J1 537 aaPredicted RBP13.34□□□□□ -0.27
TRIM4-201ENST00000349062 SNX11Q9Y5W9 270 aa13.34□□□□□ -0.27
TRIM4-201ENST00000349062 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.27
TRIM4-201ENST00000349062 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
TRIM4-201ENST00000349062 UMPSP11172 480 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 IGFBP4P22692 258 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 DRD3P35462 400 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 HPCAL1P37235 193 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 GANABQ14697 944 aaKnown RBP13.33□□□□□ -0.28
TRIM4-201ENST00000349062 PNCKQ6P2M8 343 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 LRRTM4Q86VH4 590 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 CNIH3Q8TBE1 160 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 RAD51AP1Q96B01 352 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 PRDM8Q9NQV8 689 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 RAD18Q9NS91 495 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 CNOT11Q9UKZ1 510 aaKnown RBP13.33□□□□□ -0.28
TRIM4-201ENST00000349062 ORC6Q9Y5N6 252 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
TRIM4-201ENST00000349062 FMO3P31513 532 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 SLC19A1P41440 591 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
TRIM4-201ENST00000349062 OCA2Q04671 838 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 NFATC3Q12968 1075 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 TP53BP2Q13625 1128 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 CEP68Q76N32 757 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 TMEM145Q8NBT3 493 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 SLC35A5Q9BS91 424 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 ASPSCR1Q9BZE9 553 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 CABIN1Q9Y6J0 2220 aa13.33□□□□□ -0.28
TRIM4-201ENST00000349062 SLC16A5O15375 505 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 RB1P06400 928 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 VLDLRP98155 873 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 IRF4Q15306 451 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PPP1R14BQ96C90 147 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PYURFQ96I23 114 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 FCRL4Q96PJ5 515 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 UHRF1Q96T88 793 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 SLC27A6Q9Y2P4 619 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 TDRD6O60522 2096 aaKnown RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PLXNB3Q9ULL4 1909 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 GSTT2P0CG29 244 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 EPHA2P29317 976 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 TIA1P31483 386 aaKnown RBP eCLIP13.32□□□□□ -0.284e-7■□□□□ 9.9
TRIM4-201ENST00000349062 DGCR6Q14129 220 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 GBX1Q14549 363 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 DUSP6Q16828 381 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PAGE2BQ5JRK9 111 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PIP5KL1Q5T9C9 394 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 RNF31Q96EP0 1072 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 REXO5Q96IC2 774 aaKnown RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 CDH7Q9ULB5 785 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 M0R129 80 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 TPST2O60704 377 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 SCELO95171 688 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 PTNP21246 168 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 POU1F1P28069 291 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 TAS2R38P59533 333 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 RAB8AP61006 207 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 INTS11Q5TA45 600 aaKnown RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 FAM46CQ5VWP2 391 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 NXPE4Q6UWF7 544 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 ADHFE1Q8IWW8 467 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 OR56A3Q8NH54 315 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 DCAF13Q9NV06 445 aaKnown RBP13.32□□□□□ -0.28
TRIM4-201ENST00000349062 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 SEC16AO15027 2179 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
TRIM4-201ENST00000349062 HTR3EA5X5Y0 456 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 NPPAP01160 153 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 PCYT1AP49585 367 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 WNT3P56703 355 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 SRSF11Q05519 484 aaKnown RBP13.31□□□□□ -0.28
TRIM4-201ENST00000349062 VMACQ2NL98 169 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 SLC36A3Q495N2 470 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 AMER3Q8N944 861 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 TSACCQ96A04 125 aaPredicted RBP13.31□□□□□ -0.28
TRIM4-201ENST00000349062 VPS35Q96QK1 796 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ANKRA2Q9H9E1 313 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 CAPN10Q9HC96 672 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 SYNDIG1LA6NDD5 238 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 KCNK5O95279 499 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF12P17014 697 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms