RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TSTD1Q8NFU3 115 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ZFP90Q8TF47 636 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 NUS1Q96E22 293 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 FAM129BQ96TA1 746 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 IMP3Q9NV31 184 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 ZNF451Q9Y4E5 1061 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 PCDHGA10Q9Y5H3 936 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 NPC1O15118 1278 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 CDRT1O95170 752 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 HMGCLP35914 325 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 KHKP50053 298 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 SLC13A2Q13183 592 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 E2F2Q14209 437 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 EIF4HQ15056 248 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 EXOC3L2Q2M3D2 409 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 NDUFAF6Q330K2 333 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 PLEKHS1Q5SXH7 462 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 GALNT12Q8IXK2 581 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 PAPD5Q8NDF8 572 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 OR13F1Q8NGS4 319 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 TMEM203Q969S6 136 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 CPNE5Q9HCH3 593 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 PHF11Q9UIL8 331 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 FAM86C2PA6NEL3 165 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 UPK3BL1B0FP48 263 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 UPK3BL2E5RIL1 263 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 MRPS14O60783 128 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 GPRC6AQ5T6X5 926 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ZNF691Q5VV52 312 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 Q6ZNX1 250 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 VTCN1Q7Z7D3 282 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 RNF130Q86XS8 419 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 IZUMO1Q8IYV9 350 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ADAMTS15Q8TE58 950 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 CCM2Q9BSQ5 444 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 INPP5KQ9BT40 448 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 RHBGQ9H310 441 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 NEK6Q9HC98 313 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 SPHK2Q9NRA0 654 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 FARSBQ9NSD9 589 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 SACM1LQ9NTJ5 587 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 PI15O43692 258 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 GABBR2O75899 941 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 CD40LGP29965 261 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 SELPLGQ14242 412 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ARSIQ5FYB1 569 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 CRB2Q5IJ48 1285 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 LY6G5CQ5SRR4 150 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 C11orf24Q96F05 449 aaPredicted RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 ART5Q96L15 291 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 RHCGQ9UBD6 479 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 USP22Q9UPT9 525 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 ADH1BP00325 375 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 ITGAMP11215 1152 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 CD83Q01151 205 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 EMX1Q04741 257 aaPredicted RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 RUNDC3AQ59EK9 446 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 OTUD1Q5VV17 481 aaPredicted RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 OR8H1Q8NGG4 311 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SIPA1Q96FS4 1042 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 MRPS33Q9Y291 106 aaKnown RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 OR6C70A6NIJ9 312 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 STSP08842 583 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 ARNTP27540 789 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 CRISP3P54108 245 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 UBXN2BQ14CS0 331 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 PNCKQ6P2M8 343 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 PRR23CQ6ZRP0 262 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SMARCD2Q92925 531 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 RAD51AP1Q96B01 352 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 CNDP2Q96KP4 475 aaKnown RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 C14orf119Q9NWQ9 140 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SLC16A5O15375 505 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 OR1F1O43749 312 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 KHDRBS3O75525 346 aaKnown RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 GSRP00390 522 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 PROX2Q3B8N5 592 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 ANKDD1AQ495B1 522 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 RNASE12Q5GAN4 147 aaKnown RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 C10orf62Q5T681 223 aaPredicted RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 CCBE1Q6UXH8 406 aaPredicted RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 PTRH1Q86Y79 214 aaKnown RBP14.21□□□□□ -0.13
NUP50-201ENST00000347635 FAM20CQ8IXL6 584 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SUN5Q8TC36 379 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SMURF1Q9HCE7 757 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 DNAJC27Q9NZQ0 273 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 SEC14L4Q9UDX3 406 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 STOML2Q9UJZ1 356 aa14.21□□□□□ -0.13
NUP50-201ENST00000347635 DRGXA6NNA5 263 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 ARHGEF33A8MVX0 844 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 SOX14O95416 240 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 PTTG1O95997 202 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 MPC1LP0DKB6 136 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 JUPP14923 745 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 NDUFS1P28331 727 aa14.21□□□□□ -0.14
NUP50-201ENST00000347635 ZNF763Q0D2J5 394 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms