RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 COMMD7Q86VX2 200 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 SKA3Q8IX90 412 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 LAS2Q8IYD9 372 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 BARD1Q99728 777 aaKnown RBP18.76■□□□□ 0.59
HDAC4-201ENST00000345617 C2orf92A0A1B0GVN3 265 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 FAM159BA6NKW6 160 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 FAAHO00519 579 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PRAF2O60831 178 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 LUMP51884 338 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-201ENST00000345617 HERC2P3Q9BVR0 1158 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 FARS2O95363 451 aaKnown RBP18.76■□□□□ 0.59
HDAC4-201ENST00000345617 GAL3ST4Q96RP7 486 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 FAM86C1Q9NVL1 165 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PKP4Q99569 1192 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 SIX4Q9UIU6 781 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 NAP1L6A6NFF2 107 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 TGFB1I1O43294 461 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 GDPGP1Q6ZNW5 385 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 SVBPQ8N300 66 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 CHFRQ96EP1 664 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ELOVL2Q9NXB9 296 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ANKRD33BA6NCL7 494 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 PHYHO14832 338 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ENTPD1P49961 510 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF616Q08AN1 781 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 TUSC3Q13454 348 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 MADCAM1Q13477 382 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 KCNJ11Q14654 390 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 HFE2Q6ZVN8 426 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 NTAN1Q96AB6 310 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ARL5BQ96KC2 179 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 ACBD6Q9BR61 282 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 OR51E2Q9H255 320 aa18.76■□□□□ 0.59
HDAC4-201ENST00000345617 DECR1Q16698 335 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 COQ5Q5HYK3 327 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 TMEM45AQ9NWC5 275 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF175Q9Y473 711 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 EEF1E1O43324 174 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 CKMT2P17540 419 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 MINDY4Q4G0A6 757 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 FAM199XQ6PEV8 388 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 WDR18Q9BV38 432 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 PCDHB14Q9Y5E9 798 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 DCCP43146 1447 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 TNFSF9P41273 254 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 FBXW11Q9UKB1 542 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 J3QLW9 94 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF19P17023 458 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 PLA2G4EQ3MJ16 856 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 MBLAC2Q68D91 279 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 PCYT1BQ9Y5K3 369 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ESX1Q8N693 406 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 OR5B17Q8NGF7 314 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 SECISBP2Q96T21 854 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 POPDC3Q9HBV1 291 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 DDTLA6NHG4 134 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 EEDO75530 441 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 MAOAP21397 527 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 FGL2Q14314 439 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 TMEM205Q6UW68 189 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ZCCHC3Q9NUD5 404 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 AIPO00170 330 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 PLATP00750 562 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 FRKP42685 505 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 CDK6Q00534 326 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 CCBE1Q6UXH8 406 aaPredicted RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 OR5T2Q8NGG2 359 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 TWNKQ96RR1 684 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 NOCTQ9UK39 431 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 LCHNA4D1U4 455 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 MSI1O43347 362 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 METTL11BQ5VVY1 283 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ZER1Q7Z7L7 766 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 PYCR2Q96C36 320 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 BIRC7Q96CA5 298 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 HEPHQ9BQS7 1158 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 DDX4Q9NQI0 724 aaKnown RBP18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ABCB8Q9NUT2 735 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF226Q9NYT6 803 aa18.75■□□□□ 0.59
HDAC4-201ENST00000345617 ETFAP13804 333 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 GSG1LQ6UXU4 331 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 FAM230AA0A1W2PPH8 454 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CHRNB2P17787 502 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 NAT8LQ8N9F0 302 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 PEX13Q92968 403 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 FN3KQ9H479 309 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 TVP23AA6NH52 213 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 E7EQ34 232 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 E2F3O00716 465 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 HCRTR2O43614 444 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 TACR2P21452 398 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CRHR2Q13324 411 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 S100A7AQ86SG5 101 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 NPAS3Q8IXF0 933 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CAMKVQ8NCB2 501 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 PROKR1Q8TCW9 393 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms