RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FFAR3O14843 346 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 DSCR3O14972 297 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 AZIN1O14977 448 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 GPR42O15529 346 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ESRRBO95718 433 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPM4-202ENST00000344824 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 PKNOX1P55347 436 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 FOXL2P58012 376 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ABATP80404 500 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 C19orf57Q0VDD7 668 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 GALNT1Q10472 559 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 KCNAB2Q13303 367 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 UGT8Q16880 541 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 CATSPEREQ5SY80 951 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ZNF517Q6ZMY9 492 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 C17orf64Q86WR6 236 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 AFAP1L2Q8N4X5 818 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 DTWD1Q8N5C7 304 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 RFWD2Q8NHY2 731 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PIWIL2Q8TC59 973 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 C17orf62Q9BQA9 187 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 MAU2Q9Y6X3 613 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 H0YGG7 62 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 H7BY64 318 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 DNAJB5O75953 348 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 CLDN9O95484 217 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 CAPN1P07384 714 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 EZRP15311 586 aaKnown RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 GNAZP19086 355 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 HMOX2P30519 316 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 OR1D4P47884 311 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 ARF3P61204 181 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 MEF2AQ02078 507 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 DOC2AQ14183 400 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 CPSF6Q16630 551 aaKnown RBP eCLIP13.12□□□□□ -0.31
TPM4-202ENST00000344824 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 CPZQ66K79 652 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 RAB43Q86YS6 212 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 ZNF843Q8N446 348 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 CSNK1A1LQ8N752 337 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 METTL6Q8TCB7 284 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 PRAP1Q96NZ9 151 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 NTMT1Q9BV86 223 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 PCBD2Q9H0N5 130 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 GPRC5BQ9NZH0 403 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 TRPS1Q9UHF7 1281 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
TPM4-202ENST00000344824 KCNMB2Q9Y691 235 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 USH1CQ9Y6N9 552 aa13.12□□□□□ -0.31
TPM4-202ENST00000344824 A0A0G2JND7 137 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 HYKKA2RU49 373 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
TPM4-202ENST00000344824 SNUPNO95149 360 aaKnown RBP13.11□□□□□ -0.31
TPM4-202ENST00000344824 CD22P20273 847 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 HTR6P50406 440 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SLBPQ14493 270 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM4-202ENST00000344824 MUM1Q2TAK8 710 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 HKDC1Q2TB90 917 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 FAM214AQ32MH5 1076 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SGO1Q5FBB7 561 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 KANK2Q63ZY3 851 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 NXPE4Q6UWF7 544 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SLCO4C1Q6ZQN7 724 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SHISA6Q6ZSJ9 500 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 SPATA21Q7Z572 469 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 DDIASQ8IXT1 998 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 PRSS58Q8IYP2 241 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 CLYBLQ8N0X4 340 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
TPM4-202ENST00000344824 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 MTFMTQ96DP5 389 aaKnown RBP13.11□□□□□ -0.31
TPM4-202ENST00000344824 YIPF2Q9BWQ6 316 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 NUF2Q9BZD4 464 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 FAM117AQ9C073 453 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 HAO1Q9UJM8 370 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 RUVBL1Q9Y265 456 aaKnown RBP13.11□□□□□ -0.31
TPM4-202ENST00000344824 KLK4Q9Y5K2 254 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms