RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ANKRD37Q7Z713 158 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TCAIMQ8N3R3 496 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TRPV3Q8NET8 790 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 DNAJB14Q8TBM8 379 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 METTL21AQ8WXB1 218 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TSLPQ969D9 159 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 NXNL1Q96CM4 212 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 OR1F2PQ96R84 312 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TUBB6Q9BUF5 446 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CDC42EP4Q9H3Q1 356 aaKnown RBP13.59□□□□□ -0.23
HMGN3-202ENST00000344726 ACSS3Q9H6R3 686 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 GPRC5BQ9NZH0 403 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 COPG1Q9Y678 874 aaKnown RBP13.59□□□□□ -0.23
HMGN3-202ENST00000344726 UBXN8O00124 270 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 E2F3O00716 465 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 KERAO60938 352 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 F10P00742 488 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 C2P06681 752 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 FHP07954 510 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 LTA4HP09960 611 aaKnown RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 CTAGE8P0CG41 777 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 HNRNPH1P31943 449 aaKnown RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 AGTR2P50052 363 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 DOC2AQ14183 400 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 UAP1Q16222 522 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 LCE2DQ5TA82 110 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 TBC1D1Q86TI0 1168 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 CTAGE4Q8IX94 777 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 PLPP5Q8NEB5 264 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 PRR7Q8TB68 274 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 STAG3L4Q8TBR4 150 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 IFT81Q8WYA0 676 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 TBC1D20Q96BZ9 403 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 LMF1Q96S06 567 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 FUT8Q9BYC5 575 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 SLC29A3Q9BZD2 475 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 EPS8L2Q9H6S3 715 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 CNOT10Q9H9A5 744 aaKnown RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 NMRAL1Q9HBL8 299 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 SNX15Q9NRS6 342 aa13.58□□□□□ -0.24
HMGN3-202ENST00000344726 MTRF1LQ9UGC7 380 aaKnown RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 ERRFI1Q9UJM3 462 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 ZNF490Q9ULM2 529 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-202ENST00000344726 A0A0G2JN53 185 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 H2AFYO75367 372 aaKnown RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 ACSL3O95573 720 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 ALDOAP04075 364 aaKnown RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 GP1BBP13224 206 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 MTHFD2P13995 350 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 ABRAXAS2Q15018 415 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 PDK4Q16654 411 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 SNX31Q8N9S9 440 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 GRHL3Q8TE85 626 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 SSC4DQ8WTU2 575 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 MS4A6EQ96DS6 147 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 WDR34Q96EX3 536 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 FMO2Q99518 471 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 CAPS2Q9BXY5 557 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 CD244Q9BZW8 370 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 EHD1Q9H4M9 534 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 NT5DC2Q9H857 520 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 C19orf25Q9UFG5 118 aaPredicted RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 ACOT9Q9Y305 439 aa13.57□□□□□ -0.24
HMGN3-202ENST00000344726 DIDO1Q9BTC0 2240 aaKnown RBP13.57□□□□□ -0.24
HMGN3-202ENST00000344726 DOPEY1Q5JWR5 2465 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 A0A087X1B8 175 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 LRIT2A6NDA9 550 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 URADA6NGE7 173 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 SUPT3HB4E1H0 165 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 CLGNO14967 610 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 B4GALT2O60909 372 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 SUPT3HO75486 399 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 WFS1O76024 890 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 TUBB4AP04350 444 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 IL10P22301 178 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 PHBP35232 272 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 BTG2P78543 158 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 RUNX2Q13950 521 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 E2F2Q14209 437 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 TLR1Q15399 786 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 NSDHLQ15738 373 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 BTBD16Q32M84 506 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
HMGN3-202ENST00000344726 SFT2D3Q587I9 215 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms