RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ADAM2Q99965 735 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 REV1Q9UBZ9 1251 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 NPHS1O60500 1241 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 CDK1P06493 297 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 IDO2Q6ZQW0 420 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 OR4K2Q8NGD2 314 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 LRTOMTQ8WZ04 291 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 COG8Q96MW5 612 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 KCNJ16Q9NPI9 418 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TEX10Q9NXF1 929 aaPredicted RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 BPIP17213 487 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 SCNN1GP51170 649 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 SLC36A3Q495N2 470 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 KANK2Q63ZY3 851 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 Q9N2J8 555 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 TLR5O60602 858 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 EIF4EP06730 217 aaKnown RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF43P17038 809 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 PEA15Q15121 130 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 SAMD12Q8N8I0 201 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 KIAA1143Q96AT1 154 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 C7orf26Q96N11 449 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 TPT1P8Q9HAU6 139 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 SLC2A8Q9NY64 477 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 AQP12BA6NM10 295 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 NDST3O95803 873 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 FASLGP48023 281 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 WSCD1Q658N2 575 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 RBM15BQ8NDT2 890 aaKnown RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ACOT11Q8WXI4 607 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ITM2CQ9NQX7 267 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM14AQ9Y6G1 99 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 GLUD1P00367 558 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 GK2Q14410 553 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 C2orf73Q8N5S3 287 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 PAHP00439 452 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 PGM5Q15124 567 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 SLC35F1Q5T1Q4 408 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 OR5H2Q8NGV7 314 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 OR2S2Q9NQN1 319 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 HEATR5BQ9P2D3 2071 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 PFKLP17858 780 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF404Q494X3 552 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 PHF19Q5T6S3 580 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 OR2T5Q6IEZ7 315 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 NPNTQ6UXI9 565 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 OR2T29Q8NH02 315 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF420Q8TAQ5 688 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-201ENST00000342988 ARHGAP20Q9P2F6 1191 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
SMAD4-201ENST00000342988 BLOC1S5-TXNDC5H3BN57 136 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 ADAM10O14672 748 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 GJB6O95452 261 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 PIRTP0C851 137 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 CX3CR1P49238 355 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 DSTNP60981 165 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 MRPS6P82932 125 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 HMGN3Q15651 99 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 TSTQ16762 297 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 UGT8Q16880 541 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 ASCC1Q8N9N2 400 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 SPRYD4Q8WW59 207 aaPredicted RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 NAA11Q9BSU3 229 aaPredicted RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 OR51E2Q9H255 320 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 MKS1Q9NXB0 559 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 NDUFS4O43181 175 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 C6P13671 934 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 TPRA1Q86W33 373 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 SLC13A3Q8WWT9 602 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 PNPOQ9NVS9 261 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 GJD2Q9UKL4 321 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 CNOT4O95628 575 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 RPL7P18124 248 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 AQP4P55087 323 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 UBE2G2P60604 165 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 MEAF6Q9HAF1 191 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 LCMT2O60294 686 aaKnown RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 SNAPINO95295 136 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 ALDOBP05062 364 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
SMAD4-201ENST00000342988 TAF9Q16594 264 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 OR9A4Q8NGU2 314 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 WDR45Q9Y484 360 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 CABIN1Q9Y6J0 2220 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 F8VP50 259 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 PAGE1O75459 146 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 OR2B3O76000 313 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 HEXBP07686 556 aa17.09■□□□□ 0.33
SMAD4-201ENST00000342988 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms