RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMEM163Q8TC26 289 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 ZBED3Q96IU2 234 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 SERHLQ9NQF3 203 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 SDHAF2Q9NX18 166 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 CACNG2Q9Y698 323 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 OR51F1A6NGY5 319 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 TNFRSF11BO00300 401 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 TPST2O60704 377 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 RPP40O75818 363 aaKnown RBP17.83■□□□□ 0.45
SMPD1-201ENST00000342245 DPEP1P16444 411 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.45
SMPD1-201ENST00000342245 NCF4Q15080 339 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 EFCAB12Q6NXP0 572 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 VTCN1Q7Z7D3 282 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 ADGRF3Q8IZF5 1079 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 C10orf111Q8N326 155 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 MTMR14Q8NCE2 650 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 REG4Q9BYZ8 158 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF222Q9UK12 451 aa17.83■□□□□ 0.45
SMPD1-201ENST00000342245 A0A0A6YYJ9 748 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 PRAMEF33A0A0G2JMD5 474 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 LOC285095A0A1B0GVY8 99 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 PRAMEF10O60809 474 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 APEX1P27695 318 aaKnown RBP17.83■□□□□ 0.44
SMPD1-201ENST00000342245 MAPK1P28482 360 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 TRIM23P36406 574 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 HAAOP46952 286 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 DAOAP59103 153 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 PUDPQ08623 228 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 VEZF1Q14119 521 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 TSC22D1Q15714 1073 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 TUSC1Q2TAM9 212 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 SLC39A12Q504Y0 691 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 LRFN4Q6PJG9 635 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF655Q8N720 491 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-201ENST00000342245 PNPLA1Q8N8W4 532 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 OR4A15Q8NGL6 344 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 C7orf34Q96L11 122 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 TBATAQ96M53 351 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 KCTD7Q96MP8 289 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 CDK15Q96Q40 435 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 TXNL4BQ9NX01 149 aaKnown RBP17.83■□□□□ 0.44
SMPD1-201ENST00000342245 MRPS7Q9Y2R9 242 aaKnown RBP17.83■□□□□ 0.44
SMPD1-201ENST00000342245 SCN1AP35498 2009 aa17.83■□□□□ 0.44
SMPD1-201ENST00000342245 LDB2O43679 373 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SOX3P41225 446 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 RECQLP46063 649 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 NDUFV1P49821 464 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF81P51508 661 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 PPIGQ13427 754 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 DOK6Q6PKX4 331 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 METTL7BQ6UX53 244 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF730Q6ZMV8 503 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 CLRN3Q8NCR9 226 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 REPS2Q8NFH8 660 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 OR8K3Q8NH51 312 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF668Q96K58 619 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SLC39A8Q9C0K1 460 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 MYOZ2Q9NPC6 264 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SLC6A13Q9NSD5 602 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 HPF1Q9NWY4 346 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 LOC102723532A0A0G2JNH3 316 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 INPPL1O15357 1258 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 CSO75390 466 aaKnown RBP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 ARF4P18085 180 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 CD9P21926 228 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 LMO2P25791 158 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 MXD1Q05195 221 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SNAPC1Q16533 368 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 MS4A15Q8N5U1 240 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 PROKR2Q8NFJ6 384 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 OR4L1Q8NH43 312 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 ERMAPQ96PL5 475 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-201ENST00000342245 OR2M2Q96R28 347 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SLC35C2Q9NQQ7 365 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 SNX10Q9Y5X0 201 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 PLXNA1Q9UIW2 1896 aa17.82■□□□□ 0.44
SMPD1-201ENST00000342245 GLYATL1P3A0A0U1RQE8 302 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 S100A6P06703 90 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SLC6A1P30531 599 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SSTR4P31391 388 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 RENBPP51606 427 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 LGALSLQ3ZCW2 172 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-201ENST00000342245 CNIH2Q6PI25 160 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SLC5A8Q8N695 610 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ST8SIA2Q92186 375 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ATOH1Q92858 354 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-201ENST00000342245 FATE1Q969F0 183 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 C12orf57Q99622 126 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 LRTM1Q9HBL6 345 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ZSWIM8A7E2V4 1837 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 ISM1B1AKI9 464 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 PPEF2O14830 753 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 HCRTO43612 131 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 MPC2O95563 127 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 SLC10A3P09131 477 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 PTPN6P29350 595 aa17.81■□□□□ 0.44
SMPD1-201ENST00000342245 CCR1P32246 355 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms