RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 CTNNAL1Q9UBT7 734 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 NCF1BA6NI72 391 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 NCF1CA8MVU1 366 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 WDR47O94967 919 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 RNH1P13489 461 aaKnown RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 NCF1P14598 390 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 HYAL2Q12891 473 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 STEAP4Q687X5 459 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 ZC3HC1Q86WB0 502 aaKnown RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 ARMC2Q8NEN0 867 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 VPS39Q96JC1 886 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 FAR2Q96K12 515 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 UNKQ9C0B0 810 aaKnown RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 CTAGE15A4D2H0 777 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 EFCAB8A8MWE9 144 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 SP1P08047 785 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 SNRPB2P08579 225 aaKnown RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 GRNP28799 593 aaKnown RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 PAFAH1B1P43034 410 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 TAS2R39P59534 338 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 BTN3A2P78410 334 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 C3AR1Q16581 482 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 PPP1R3AQ16821 1122 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 C18orf21Q32NC0 220 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-202ENST00000339307 SLC25A25Q6KCM7 469 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 CTAGE6Q86UF2 777 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 GPAMQ9HCL2 828 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 TINAGQ9UJW2 476 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 PCDHGB6Q9Y5F9 930 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
ITGA4-202ENST00000339307 A0A0G2JN53 185 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 SEC31AO94979 1220 aaKnown RBP18.22■□□□□ 0.51
ITGA4-202ENST00000339307 PRF1P14222 555 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 TPP2P29144 1249 aaPredicted RBP18.22■□□□□ 0.51
ITGA4-202ENST00000339307 GDF5P43026 501 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 CYB561P49447 251 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 ART3Q13508 389 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 FASTKD3Q14CZ7 662 aaKnown RBP18.22■□□□□ 0.51
ITGA4-202ENST00000339307 TSNQ15631 228 aaKnown RBP18.22■□□□□ 0.51
ITGA4-202ENST00000339307 KRTCAP3Q53RY4 240 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 QSOX2Q6ZRP7 698 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 TICAM1Q8IUC6 712 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 CREG2Q8IUH2 290 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 MCEMP1Q8IX19 187 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 ZBED8Q8IZ13 594 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 ZNF808Q8N4W9 903 aaPredicted RBP18.22■□□□□ 0.51
ITGA4-202ENST00000339307 ELP5Q8TE02 316 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 SCMH1Q96GD3 660 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 GPR137Q96N19 417 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 DEFB126Q9BYW3 111 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 SLC6A16Q9GZN6 736 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 PRDM9Q9NQV7 894 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 SNX24Q9Y343 169 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 OARD1Q9Y530 152 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 CENPEQ02224 2701 aa18.22■□□□□ 0.51
ITGA4-202ENST00000339307 CRYBG3Q68DQ2 2970 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 SLC25A12O75746 678 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 PIAS1O75925 651 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 SERPINA6P08185 405 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 ABOP16442 354 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 GNAZP19086 355 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 HTR1EP28566 365 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 TNFRSF8P28908 595 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 HNMTP50135 292 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 STXBP1P61764 594 aaKnown RBP18.21■□□□□ 0.51
ITGA4-202ENST00000339307 ZNF468Q5VIY5 522 aaPredicted RBP18.21■□□□□ 0.51
ITGA4-202ENST00000339307 RPTNQ6XPR3 784 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 CA13Q8N1Q1 262 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 THAP3Q8WTV1 239 aaPredicted RBP18.21■□□□□ 0.51
ITGA4-202ENST00000339307 ANKRD49Q8WVL7 239 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 TMEM125Q96AQ2 219 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 NAPGQ99747 312 aaPredicted RBP18.21■□□□□ 0.51
ITGA4-202ENST00000339307 NECTIN3Q9NQS3 549 aa18.21■□□□□ 0.51
ITGA4-202ENST00000339307 PNO1Q9NRX1 252 aaKnown RBP18.21■□□□□ 0.51
ITGA4-202ENST00000339307 CREBBPQ92793 2442 aa18.21■□□□□ 0.5
ITGA4-202ENST00000339307 CELSR2Q9HCU4 2923 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 SAGE2PA6NJ88 616 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 FCHO1O14526 889 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 ZNHIT1O43257 154 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 NEURL1O76050 574 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 C1GALT1C1LP0DN25 315 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 MRPS25P82663 173 aaKnown RBP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 FRG1Q14331 258 aaKnown RBP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 SLBPQ14493 270 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 ADAMTSL2Q86TH1 951 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 SPPL2CQ8IUH8 684 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 CEP97Q8IW35 865 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 LGI4Q8N135 537 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 SPATA6LQ8N4H0 392 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 CREB3L4Q8TEY5 395 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 ANKRD7Q92527 254 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 FRMD6Q96NE9 622 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 KRT12Q99456 494 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 CLK4Q9HAZ1 481 aaKnown RBP18.2■□□□□ 0.5
ITGA4-202ENST00000339307 NSMCE4AQ9NXX6 385 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 TXNDC16Q9P2K2 825 aa18.2■□□□□ 0.5
ITGA4-202ENST00000339307 FBXW2Q9UKT8 454 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms