RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 ARMCX1Q9P291 453 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 G3BP2Q9UN86 482 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 DLGAP4Q9Y2H0 992 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 CROCCQ5TZA2 2017 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SCN3AQ9NY46 2000 aa13.84□□□□□ -0.19
NIPAL3-202ENST00000339255 SEC16AO15027 2179 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 CAPN14A8MX76 684 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 P2RX6O15547 441 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 GDF9O60383 454 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 SDC1P18827 310 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 BSGP35613 385 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 NHLH1Q02575 133 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 ACY1Q03154 408 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 KLF10Q13118 480 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 KRT72Q14CN4 511 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 NDUFA9Q16795 377 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 PRTGQ2VWP7 1150 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 DEFB110Q30KQ9 67 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 WASHC2DQ5SRD0 308 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 OR4C11Q6IEV9 310 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 TMEM214Q6NUQ4 689 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 ABHD17CQ6PCB6 329 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 RBM44Q6ZP01 1051 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 ZCCHC7Q8N3Z6 543 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 GLB1L3Q8NCI6 653 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 OR8K5Q8NH50 307 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 TMEM74Q96NL1 305 aa13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 PTPRZ1P23471 2315 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 CNOT1A5YKK6 2376 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-202ENST00000339255 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 A8MU76 341 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TMX2-CTNND1H3BSU7 103 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 GUCY1B2O75343 617 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ZNF888P0CJ79 500 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PRPS1L1P21108 318 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 GPX3P22352 226 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 HIST1H1TP22492 207 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PRDX6P30041 224 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 MAPK12P53778 367 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PLA2G16P53816 162 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 C21orf58P58505 322 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TRA2BP62995 288 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 RAE1P78406 368 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ZFP36L1Q07352 338 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 GRM7Q14831 915 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 DPY19L1Q2PZI1 675 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 HKDC1Q2TB90 917 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CCNYL2Q5T2Q4 361 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PHF19Q5T6S3 580 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 UBE3DQ7Z6J8 389 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 GPR135Q8IZ08 494 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 KCT2Q8NC54 265 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CMTM5Q96DZ9 223 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ZBTB18Q99592 522 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TUBB6Q9BUF5 446 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 KLHL31Q9H511 634 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 MYNNQ9NPC7 610 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 LHX9Q9NQ69 397 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 FGF21Q9NSA1 209 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 IRAK4Q9NWZ3 460 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CEP250Q9BV73 2442 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 KNTC1P50748 2209 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 A0A0A6YYD5 115 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TMEM150CB9EJG8 249 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ANKRD28O15084 1053 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 HCRTR1O43613 425 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 SLC22A3O75751 556 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 OR2B3O76000 313 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 STATHP02808 62 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 KLK1P06870 262 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ALOX12P18054 663 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ATP5A1P25705 553 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CCKBRP32239 447 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 RPL3P39023 403 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 MNAT1P51948 309 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 MTTPP55157 894 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ITGA1P56199 1179 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CLDN8P56748 225 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 FAM53BQ14153 422 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 RCAN2Q14206 197 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 KCNAB1Q14722 419 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PTGR1Q14914 329 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TRIP6Q15654 476 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 YOD1Q5VVQ6 348 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TLDC1Q6P9B6 456 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 BPHLQ86WA6 291 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 TTC29Q8NA56 475 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 AGBL5Q8NDL9 886 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 PROKR1Q8TCW9 393 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 UTP15Q8TED0 518 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms