RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 AHSPQ9NZD4 102 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 GIMAP2Q9UG22 337 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC22A7Q9Y694 548 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
TUBA1B-202ENST00000336023 A0A0G2JN53 185 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 A0A0G2JND7 137 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 GOLGA8QA0A0J9YX86 632 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 GOLGA8OA6NCC3 632 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 SRRM3A6NNA2 597 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 GOLGA8NF8WBI6 632 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 PLPP1O14494 284 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 PEX11AO75192 247 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 VPS4BO75351 444 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 SEC22BO75396 215 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 SCRG1O75711 98 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 B3GALT4O96024 378 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 ALOX12P18054 663 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 PRPH2P23942 346 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 GCGRP47871 477 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 FAM53BQ14153 422 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 HERC3Q15034 1050 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 AP5B1Q2VPB7 878 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 GALNTL6Q49A17 601 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 DCAF12Q5T6F0 453 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 YOD1Q5VVQ6 348 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 CEACAM20Q6UY09 585 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 METTL4Q8N3J2 472 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 CHTF18Q8WVB6 975 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 RNF31Q96EP0 1072 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 PPP3R2Q96LZ3 170 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 OR52B2Q96RD2 323 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 TAAR9Q96RI9 348 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 TBCDQ9BTW9 1192 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 SORBS1Q9BX66 1292 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 LHX9Q9NQ69 397 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 B3GALT1Q9Y5Z6 326 aa13.03□□□□□ -0.32
TUBA1B-202ENST00000336023 IL1RNP18510 177 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ALAS2P22557 587 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 BSGP35613 385 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ARFIP1P53367 373 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ARSFP54793 590 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 BTN3A2P78410 334 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ACSM2AQ08AH3 577 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 KIAA0040Q15053 153 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 RFTN2Q52LD8 501 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 SPIN4Q56A73 249 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 C6orf136Q5SQH8 315 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ACSM2BQ68CK6 577 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 NXNQ6DKJ4 435 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 OR4C11Q6IEV9 310 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 TTLL10Q6ZVT0 673 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 LARP4Q71RC2 724 aaKnown RBP eCLIP13.02□□□□□ -0.322e-22■■□□□ 14.4
TUBA1B-202ENST00000336023 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 COMMD6Q7Z4G1 85 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 DTWD1Q8N5C7 304 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 C1orf52Q8N6N3 182 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ACTRT2Q8TDY3 377 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 METTL2AQ96IZ6 378 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ELAC2Q9BQ52 826 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC7A5P2Q9GIP4 190 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 PRDM7Q9NQW5 492 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 KLHL14Q9P2G3 628 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 DHCR7Q9UBM7 475 aaKnown RBP13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 SRPK3Q9UPE1 567 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 SEC16AO15027 2179 aa13.02□□□□□ -0.32
TUBA1B-202ENST00000336023 FOXS1O43638 330 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 TNFSF15O95150 251 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 NTRK1P04629 796 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 KLK1P06870 262 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 PRR35P0CG20 571 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 SSR2P43308 183 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 RPL38P63173 70 aaKnown RBP13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 ZNF793Q6ZN11 406 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 ACAD11Q709F0 780 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 PAGE2Q7Z2X7 111 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 SPATA21Q7Z572 469 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 FNDC5Q8NAU1 212 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 OR9A4Q8NGU2 314 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 CEP70Q8NHQ1 597 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 QRFPRQ96P65 431 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 CCT8L2Q96SF2 557 aa13.02□□□□□ -0.33
TUBA1B-202ENST00000336023 ZPBPQ9BS86 351 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms