RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GALNT18Q6P9A2 607 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 ZNF793Q6ZN11 406 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 GAL3ST3Q96A11 431 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 RGMAQ96B86 450 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 TEFMQ96QE5 360 aaKnown RBP20.45■□□□□ 0.87
TPM1-204ENST00000334895 MYLK2Q9H1R3 596 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 PRDM7Q9NQW5 492 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 SAR1AQ9NR31 198 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 FGF21Q9NSA1 209 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 AIG1Q9NVV5 245 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 OCIAD1Q9NX40 245 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 ASIC5Q9NY37 505 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 TMED5Q9Y3A6 229 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 COPG1Q9Y678 874 aaKnown RBP20.45■□□□□ 0.87
TPM1-204ENST00000334895 FITM1A5D6W6 292 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 FCHO1O14526 889 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 ZSCAN9O15535 394 aaPredicted RBP20.45■□□□□ 0.86
TPM1-204ENST00000334895 GBAP04062 536 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 NCF2P19878 526 aaPredicted RBP20.45■□□□□ 0.86
TPM1-204ENST00000334895 TACR1P25103 407 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 TIA1P31483 386 aaKnown RBP eCLIP20.45■□□□□ 0.86
TPM1-204ENST00000334895 RAP1GDS1P52306 607 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 RIPOR1Q6ZS17 1223 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 ZNF655Q8N720 491 aaPredicted RBP20.45■□□□□ 0.86
TPM1-204ENST00000334895 SLC45A3Q96JT2 553 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 C10orf90Q96M02 699 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 TMEM74Q96NL1 305 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 NOP53Q9NZM5 478 aaKnown RBP20.45■□□□□ 0.86
TPM1-204ENST00000334895 TRIM33Q9UPN9 1127 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 GPR45Q9Y5Y3 372 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 KIF26BQ2KJY2 2108 aa20.45■□□□□ 0.86
TPM1-204ENST00000334895 FTH1P19P0C7X4 201 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 G6PDP11413 515 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 BCKDHAP12694 445 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 ACPPP15309 386 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 SDC1P18827 310 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 TPP2P29144 1249 aaPredicted RBP20.44■□□□□ 0.86
TPM1-204ENST00000334895 GCGRP47871 477 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 UBAP2LQ14157 1087 aaKnown RBP20.44■□□□□ 0.86
TPM1-204ENST00000334895 TCTE1Q5JU00 501 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 OR4C11Q6IEV9 310 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 DTWD1Q8N5C7 304 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 BMPERQ8N8U9 685 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 N4BP2L2Q92802 583 aaPredicted RBP20.44■□□□□ 0.86
TPM1-204ENST00000334895 QRFPRQ96P65 431 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 CENPKQ9BS16 269 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 AHSPQ9NZD4 102 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 SCN3AQ9NY46 2000 aa20.44■□□□□ 0.86
TPM1-204ENST00000334895 PTPRBP23467 1997 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 TXNDC9O14530 226 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 OR2B3O76000 313 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 KLK1P06870 262 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 CDK4P11802 303 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 CD1EP15812 388 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 ARFIP1P53367 373 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 ACY1Q03154 408 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 MAD2L1Q13257 205 aaPredicted RBP20.43■□□□□ 0.86
TPM1-204ENST00000334895 ISXQ2M1V0 245 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 TRIM40Q6P9F5 258 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 PRSS41Q7RTY9 318 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 PDSS2Q86YH6 399 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 LIX1Q8N485 282 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 KCNC2Q96PR1 638 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 OR6C1Q96RD1 312 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 NLNQ9BYT8 704 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 BRINP2Q9C0B6 783 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 ACTL8Q9H568 366 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 DDX31Q9H8H2 851 aaKnown RBP20.43■□□□□ 0.86
TPM1-204ENST00000334895 ARMCX1Q9P291 453 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 BAIAP2L1Q9UHR4 511 aa20.43■□□□□ 0.86
TPM1-204ENST00000334895 ANKRD28O15084 1053 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 PCDH7O60245 1069 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 MT-CO3P00414 261 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 ALOX12P18054 663 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CSTF2P33240 577 aaKnown RBP eCLIP20.42■□□□□ 0.86
TPM1-204ENST00000334895 SSR2P43308 183 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 SIM1P81133 766 aaPredicted RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 PTGR1Q14914 329 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 PRAMEF17Q5VTA0 474 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CYP20A1Q6UW02 462 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 NUDT13Q86X67 352 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CPSF7Q8N684 471 aaKnown RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 FITM2Q8N6M3 262 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 AGBL5Q8NDL9 886 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 SRFBP1Q8NEF9 429 aaKnown RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 OR8K5Q8NH50 307 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 TBCDQ9BTW9 1192 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 SDR39U1Q9NRG7 319 aaPredicted RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 IRAK4Q9NWZ3 460 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 MCM8Q9UJA3 840 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 ADAM29Q9UKF5 820 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 EIF3LQ9Y262 564 aaKnown RBP20.42■□□□□ 0.86
TPM1-204ENST00000334895 SLC22A7Q9Y694 548 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 A0A0A6YYD5 115 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 HYKKA2RU49 373 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 URADA6NGE7 173 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 EFCAB7A8K855 629 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 TMPRSS11DO60235 418 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 CCDC22O60826 627 aa20.42■□□□□ 0.86
TPM1-204ENST00000334895 DCTN3O75935 186 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms