RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 KCNC3Q14003 757 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 CTSL3PQ5NE16 218 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 GHDCQ8N2G8 530 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 Q8N402 240 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 OR4K2Q8NGD2 314 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 ARHGAP39Q9C0H5 1083 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 RLIMQ9NVW2 624 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 PLEKHB1Q9UF11 243 aaPredicted RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 RRN3P2A6NIE6 340 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 A8MUA0 341 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 PITPNM1O00562 1244 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 FABP7O15540 132 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 ETV1P50549 477 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 CACNB2Q08289 660 aaPredicted RBP23.41■■□□□ 1.34
SOX1-201ENST00000330949 RIN1Q13671 783 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 SLC34A3Q8N130 599 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 AP3S1Q92572 193 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 NIPSNAP1Q9BPW8 284 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 GALNT9Q9HCQ5 603 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 ENOPH1Q9UHY7 261 aa23.41■■□□□ 1.34
SOX1-201ENST00000330949 MANBAO00462 879 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 AP2A2O94973 939 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 RAF1P04049 648 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 IFNA16P05015 189 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 HMGCLP35914 325 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PBX3P40426 434 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 GRK1Q15835 563 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PUS10Q3MIT2 529 aaKnown RBP23.4■■□□□ 1.34
SOX1-201ENST00000330949 ABHD16BQ9H3Z7 469 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 NSUN3Q9H649 340 aaKnown RBP23.4■■□□□ 1.34
SOX1-201ENST00000330949 ERVMER34-1Q9H9K5 563 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PHF11Q9UIL8 331 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 TMCC3Q9ULS5 477 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 DLGAP4Q9Y2H0 992 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 DOCK3Q8IZD9 2030 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 A8MVJ9 347 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 TPOP07202 933 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 ABATP80404 500 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 SBSNQ6UWP8 590 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PTCHD4Q6ZW05 846 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 LGI4Q8N135 537 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 TSSK3Q96PN8 268 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PANX1Q96RD7 426 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 RANBP3Q9H6Z4 567 aaPredicted RBP23.4■■□□□ 1.34
SOX1-201ENST00000330949 TRPS1Q9UHF7 1281 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 AP1M2Q9Y6Q5 423 aa23.4■■□□□ 1.34
SOX1-201ENST00000330949 PURAQ00577 322 aaKnown RBP23.39■■□□□ 1.34
SOX1-201ENST00000330949 COL28A1Q2UY09 1125 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 TMEM86AQ8N2M4 240 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 ZNF366Q8N895 744 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 OR10Z1Q8NGY1 313 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 DPH2Q9BQC3 489 aaPredicted RBP23.39■■□□□ 1.34
SOX1-201ENST00000330949 ABCC13Q9NSE7 274 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 HTTP42858 3142 aa23.39■■□□□ 1.34
SOX1-201ENST00000330949 TOR1AO14656 332 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 CSO75390 466 aaKnown RBP23.39■■□□□ 1.33
SOX1-201ENST00000330949 ODC1P11926 461 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 CDKN1CP49918 316 aaPredicted RBP23.39■■□□□ 1.33
SOX1-201ENST00000330949 DUOXA1Q1HG43 343 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 MICAQ29983 383 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 CLLU1Q5K131 121 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 TLK2Q86UE8 772 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 USP7Q93009 1102 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 MTERF3Q96E29 417 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 DOHHQ9BU89 302 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 MND1Q9BWT6 205 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 CRISPLD1Q9H336 500 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 TMLHEQ9NVH6 421 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 PPT2Q9UMR5 302 aa23.39■■□□□ 1.33
SOX1-201ENST00000330949 A8MX80 341 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 INMT-MINDY4F8WBC2 141 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 TPST2O60704 377 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 GJB3O75712 270 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 KIR3DL1P43629 444 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 PGFP49763 221 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 CLCN4P51793 760 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 FPGTO14772 594 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 HOXD4P09016 255 aaPredicted RBP23.38■■□□□ 1.33
SOX1-201ENST00000330949 RHOQP17081 205 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 DSC3Q14574 896 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 PTGES3Q15185 160 aaKnown RBP23.38■■□□□ 1.33
SOX1-201ENST00000330949 ZNF628Q5EBL2 1059 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 BICRALQ6AI39 1079 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 ADGRG3Q86Y34 549 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 SPPL2AQ8TCT8 520 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 MAPKAP1Q9BPZ7 522 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 FOLH1BQ9HBA9 442 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 MGAT4AQ9UM21 535 aa23.38■■□□□ 1.33
SOX1-201ENST00000330949 LAMA2P24043 3122 aaKnown RBP23.38■■□□□ 1.33
SOX1-201ENST00000330949 IFNA7P01567 189 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 EBLN1P0CF75 366 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 PCSK2P16519 638 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 APEX1P27695 318 aaKnown RBP23.37■■□□□ 1.33
SOX1-201ENST00000330949 SDC2P34741 201 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 POU4F3Q15319 338 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 GPAT4Q86UL3 456 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 TIGD4Q8IY51 512 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 CREB3L1Q96BA8 519 aa23.37■■□□□ 1.33
SOX1-201ENST00000330949 POLR2J2Q9GZM3 115 aaKnown RBP23.37■■□□□ 1.33
SOX1-201ENST00000330949 TXNL4BQ9NX01 149 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms