RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR6C74A6NCV1 312 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 OR5K3A6NET4 321 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 MAGEB17A8MXT2 336 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 OCM2P0CE71 109 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 OCMP0CE72 109 aaPredicted RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 PCNAP12004 261 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 PCSK2P16519 638 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 UGT2B7P16662 529 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 CDH3P22223 829 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 GPX3P22352 226 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 PIK3R1P27986 724 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 GSTM2P28161 218 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 DIO3P55073 304 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SLC25A3Q00325 362 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 C16orf72Q14CZ0 275 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SLC5A12Q1EHB4 618 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 HLA-BQ31612 363 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 IL23RQ5VWK5 629 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 KIAA1614Q5VZ46 1190 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 ADNP2Q6IQ32 1131 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 ZNF438Q7Z4V0 828 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 GPR141Q7Z602 305 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 GPR180Q86V85 440 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 PACRGLQ8N7B6 248 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 ARL10Q8N8L6 244 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 FNDC5Q8NAU1 212 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SAP25Q8TEE9 199 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 TRUB1Q8WWH5 349 aaKnown RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 C11orf24Q96F05 449 aaPredicted RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 DUS3LQ96G46 650 aaKnown RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 MARK4Q96L34 752 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 DPH7Q9BTV6 452 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 YTHDF1Q9BYJ9 559 aaKnown RBP12.2□□□□□ -0.46
DDX39A-202ENST00000324340 DMRT3Q9NQL9 472 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 ATAD3AQ9NVI7 634 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SIRT5Q9NXA8 310 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 NLGN3Q9NZ94 848 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 VPS29Q9UBQ0 182 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SLC6A14Q9UN76 642 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 SNX7Q9UNH6 387 aa12.2□□□□□ -0.46
DDX39A-202ENST00000324340 PRR33A8MZF0 331 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 PSMD12O00232 456 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 NUDT21O43809 227 aaKnown RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 SEC22BO75396 215 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 EPN2O95208 641 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 INHBBP09529 407 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 ATP6V1B1P15313 513 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 AMD1P17707 334 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 GRIA3P42263 894 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 EPHA4P54764 986 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 STX1BP61266 288 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 NR1D2Q14995 579 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 LRRC36Q1X8D7 754 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 SPESP1Q6UW49 350 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 PRR23BQ6ZRT6 265 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 PAQR7Q86WK9 346 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 CARM1Q86X55 608 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 DEFB107AQ8IZN7 70 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 MIER2Q8N344 545 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 RNF175Q8N4F7 328 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 ANKRD53Q8N9V6 530 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 KYQ8NBH2 561 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 TTLQ8NG68 377 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 RP9Q8TA86 221 aaKnown RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 TUBA1CQ9BQE3 449 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 CLK4Q9HAZ1 481 aaKnown RBP12.19□□□□□ -0.46
DDX39A-202ENST00000324340 GID8Q9NWU2 228 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 HRASLS2Q9NWW9 162 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 NCOR1O75376 2440 aa12.19□□□□□ -0.46
DDX39A-202ENST00000324340 OR2A25A4D2G3 310 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 PATE3B3GLJ2 98 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 KPNA4O00629 521 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 MAGEB3O15480 346 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ETHE1O95571 254 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 TBX6O95947 436 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CFIP05156 583 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ALOX5P09917 674 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 COX4I1P13073 169 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GRK3P35626 688 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 AHRP35869 848 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CAPZBP47756 277 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ENTPD1P49961 510 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RPS13P62277 151 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FAM20CQ8IXL6 584 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms