RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NETO1Q8TDF5 533 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 CSGALNACT1Q8TDX6 532 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 GPR83Q9NYM4 423 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 PCDHB14Q9Y5E9 798 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 PCDHGB6Q9Y5F9 930 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 SPIN1Q9Y657 262 aaPredicted RBP14.72□□□□□ -0.05
VARS2-201ENST00000321897 PTPRZ1P23471 2315 aaPredicted RBP14.72□□□□□ -0.05
VARS2-201ENST00000321897 FAM172BPA6NC97 362 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 FADS2P1A8MWK0 482 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 STX16O14662 325 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 TOXO94900 526 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 CH25HO95992 272 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 SOWAHCQ53LP3 525 aaPredicted RBP14.72□□□□□ -0.05
VARS2-201ENST00000321897 KANK2Q63ZY3 851 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 CXorf57Q6NSI4 855 aaKnown RBP14.72□□□□□ -0.05
VARS2-201ENST00000321897 TICAM1Q8IUC6 712 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 LGI4Q8N135 537 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 KRT78Q8N1N4 520 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 ZNF296Q8WUU4 475 aaPredicted RBP14.72□□□□□ -0.05
VARS2-201ENST00000321897 UBE2FQ969M7 185 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 REPS1Q96D71 796 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 PYURFQ96I23 114 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 ASPNQ9BXN1 380 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 DNAJC27Q9NZQ0 273 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 ENTPD4Q9Y227 616 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 KCNK6Q9Y257 313 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
VARS2-201ENST00000321897 NUPL2O15504 423 aaKnown RBP14.71□□□□□ -0.05
VARS2-201ENST00000321897 POP7O75817 140 aaKnown RBP14.71□□□□□ -0.05
VARS2-201ENST00000321897 PRPS2P11908 318 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 VIPR2P41587 438 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 BCL7AQ4VC05 210 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 KIAA1614Q5VZ46 1190 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 FAM86B1Q8N7N1 296 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 OR6Q1Q8NGQ2 317 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 NFKBIDQ8NI38 313 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CCDC120Q96HB5 630 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CPNE5Q9HCH3 593 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 SEMA3GQ9NS98 782 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 TVP23BQ9NYZ1 205 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 ADAM30Q9UKF2 790 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CLEC4EQ9ULY5 219 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 WASH3PC4AMC7 463 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 GNB5O14775 395 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 OR2B3O76000 313 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 SLC10A3P09131 477 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 HTR1EP28566 365 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 DNAJA1P31689 397 aaKnown RBP14.71□□□□□ -0.05
VARS2-201ENST00000321897 ZMYND11Q15326 602 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 LILRA3Q8N6C8 439 aaPredicted RBP14.71□□□□□ -0.05
VARS2-201ENST00000321897 ZNF671Q8TAW3 534 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 COL21A1Q96P44 957 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CLSTN3Q9BQT9 956 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 HTATIP2Q9BUP3 242 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 RAD18Q9NS91 495 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 ALPK2Q86TB3 2170 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 MTHFD2P13995 350 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 PPM1AP35813 382 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 RAB8AP61006 207 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 ADPRMQ3LIE5 342 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 GPR33Q49SQ1 333 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CTSL3PQ5NE16 218 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 SMARCD3Q6STE5 483 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 VASH1Q7L8A9 365 aaPredicted RBP14.71□□□□□ -0.05
VARS2-201ENST00000321897 FAM20CQ8IXL6 584 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 IZUMO1Q8IYV9 350 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 OR8D1Q8WZ84 308 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 SNAPC3Q92966 411 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 L3HYPDHQ96EM0 354 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CCDC3Q9BQI4 270 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 MCUBQ9NWR8 336 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 RABL2BQ9UNT1 228 aa14.71□□□□□ -0.05
VARS2-201ENST00000321897 CHURC1-FNTBB4DL54 471 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 LAMP1P11279 417 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 BNC1Q01954 994 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 FOXM1Q08050 763 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 LGALS3BPQ08380 585 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 OXA1LQ15070 435 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 CRTC1Q6UUV9 634 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 ZFAND4Q86XD8 727 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 MEX3DQ86XN8 651 aaKnown RBP14.71□□□□□ -0.06
VARS2-201ENST00000321897 ZFP3Q96NJ6 502 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 FNDC11Q9BVV2 318 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 MTIF3Q9H2K0 278 aaKnown RBP14.71□□□□□ -0.06
VARS2-201ENST00000321897 RUVBL1Q9Y265 456 aaKnown RBP14.71□□□□□ -0.06
VARS2-201ENST00000321897 GPR45Q9Y5Y3 372 aa14.71□□□□□ -0.06
VARS2-201ENST00000321897 A0A1W2PRB8 838 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLITRK5O94991 958 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLC16A8O95907 504 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SOD2P04179 222 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLC9A3P48764 834 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 CLCNKAP51800 687 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 DCDC1P59894 354 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 MBTPS1Q14703 1052 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 NCEH1Q6PIU2 408 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 CNTN4Q8IWV2 1026 aa14.7□□□□□ -0.06
VARS2-201ENST00000321897 SLC43A3Q8NBI5 491 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms