RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM246Q9BRR3 403 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ST14Q9Y5Y6 855 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF182P17025 639 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 MLLT3P42568 568 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF41P51814 821 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 KCNJ11Q14654 390 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 KRBOX4Q5JUW0 171 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 TCTEX1D2Q8WW35 142 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 PEAK1Q9H792 1746 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ITGB5P18084 799 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 NDUFS1P28331 727 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 NDUFV1P49821 464 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 RGPD8O14715 1765 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 A0A0G2JMP0 313 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 A0A1W2PQ45 241 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 A0A1W2PQY0 241 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 CCL16O15467 120 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 RAD51DO75771 328 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 CH25HO95992 272 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 IFNA17P01571 189 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 DNASE1P24855 282 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF630Q2M218 657 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 OR4M2Q8NGB6 313 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 COPS5Q92905 334 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 YIPF4Q9BSR8 244 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 DPEP2Q9H4A9 486 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ADAP2Q9NPF8 381 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SOX14O95416 240 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 CAPZA1P52907 286 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ODF4Q2M2E3 257 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC22A10Q63ZE4 541 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ATG5Q9H1Y0 275 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 MAP2K3P46734 347 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 DACT2Q5SW24 774 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF550Q7Z398 422 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 JPH3Q8WXH2 748 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 CMKLR1Q99788 373 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ST6GALNAC4Q9H4F1 302 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 CPQQ9Y646 472 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM159BA6NKW6 160 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 HTRA2O43464 458 aaPredicted RBP16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 CCDC58Q4VC31 144 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 MOAP1Q96BY2 351 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 EXTL2Q9UBQ6 330 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 GXYLT2A0PJZ3 443 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 SCGB2A1O75556 95 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 PENKP01210 267 aaPredicted RBP16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 MT-ND2P03891 347 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 IFNGR1P15260 489 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 ARSFP54793 590 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF616Q08AN1 781 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 ABHD18Q0P651 414 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 SNX27Q96L92 541 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF599Q96NL3 588 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 ARL6Q9H0F7 186 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 TPT1P8Q9HAU6 139 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 STUB1Q9UNE7 303 aa16.33■□□□□ 0.21
SMCHD1-201ENST00000320876 PTTG1O95997 202 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 ENTPD1P49961 510 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 GLT8D1Q68CQ7 371 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 MBLAC2Q68D91 279 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SCRN2Q96FV2 425 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 OR52B2Q96RD2 323 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 RPL10P27635 214 aaKnown RBP16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 DPP6P42658 865 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 BCL2A1Q16548 175 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 DPY19L3Q6ZPD9 716 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SCML4Q8N228 414 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 CAMKVQ8NCB2 501 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 IL31RAQ8NI17 732 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SYT4Q9H2B2 425 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 TSTD3H0UI37 97 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 BLOC1S5-TXNDC5H3BN57 136 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 MEN1O00255 615 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 LUMP51884 338 aaPredicted RBP16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 WDR4P57081 412 aaKnown RBP16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 KCNC4Q03721 635 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 C10orf62Q5T681 223 aaPredicted RBP16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 PLEKHG7Q6ZR37 379 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 CEP68Q76N32 757 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 RNF130Q86XS8 419 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 DERL2Q9GZP9 239 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 OR2AG1Q9H205 316 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 ZDHHC3Q9NYG2 299 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 TMPRSS11EQ9UL52 423 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 INHBEP58166 350 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SFT2D3Q587I9 215 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 PLPP4Q5VZY2 271 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 NPAS3Q8IXF0 933 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 AVL9Q8NBF6 648 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 TBC1D15Q8TC07 691 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 GNPDA2Q8TDQ7 276 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 MAFKO60675 156 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms