RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CH25HO95992 272 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 THRBP10828 461 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 POU6F2P78424 691 aaPredicted RBP13.02□□□□□ -0.33
RFFL-201ENST00000315249 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 OR4N5Q8IXE1 308 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 PISDQ9UG56 409 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 AP4B1Q9Y6B7 739 aa13.02□□□□□ -0.33
RFFL-201ENST00000315249 GBX1Q14549 363 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 GRM7Q14831 915 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 HNRNPA1L2Q32P51 320 aaKnown RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 SLC2A7Q6PXP3 512 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CAPSLQ8WWF8 208 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 ADAD1Q96M93 576 aaKnown RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 FCRL3Q96P31 734 aaPredicted RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 SSNA1O43805 119 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CDK6Q00534 326 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 C1orf220Q5T0J3 134 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 BHLHE41Q9C0J9 482 aaPredicted RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 PLOD3O60568 738 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 RPP14O95059 124 aaKnown RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 GJA4P35212 333 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 NIPAL4Q0D2K0 466 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CATSPEREQ5SY80 951 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CARD17Q5XLA6 110 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 KBTBD8Q8NFY9 601 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 LRRC58Q96CX6 371 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 BCAT2O15382 392 aaPredicted RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 BMP8BP34820 402 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 LIPJQ5W064 366 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 SEC14L5O43304 696 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CYP17A1P05093 508 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CD2P06729 351 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 MLF2Q15773 248 aaPredicted RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 BTBD16Q32M84 506 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 OLFML2AQ68BL7 652 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 ZBTB22O15209 634 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 AK4P27144 223 aaPredicted RBP13.01□□□□□ -0.33
RFFL-201ENST00000315249 SLC6A4P31645 630 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 OR2B6P58173 313 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 ARG2P78540 354 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 C6orf52Q5T4I8 152 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 DIO2Q92813 273 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 CCNB1IP1Q9NPC3 277 aa13.01□□□□□ -0.33
RFFL-201ENST00000315249 A0A1W2PPL8 197 aa13□□□□□ -0.33
RFFL-201ENST00000315249 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ACOT7O00154 380 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HAT1O14929 419 aa13□□□□□ -0.33
RFFL-201ENST00000315249 MRPS21P82921 87 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 ZNF846Q147U1 533 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HTR3DQ70Z44 454 aa13□□□□□ -0.33
RFFL-201ENST00000315249 CLEC1AQ8NC01 280 aa13□□□□□ -0.33
RFFL-201ENST00000315249 SCRN2Q96FV2 425 aa13□□□□□ -0.33
RFFL-201ENST00000315249 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HMG20AQ9NP66 347 aa13□□□□□ -0.33
RFFL-201ENST00000315249 DAPL1A0PJW8 107 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ANGPTL1O95841 491 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PGRP06401 933 aa13□□□□□ -0.33
RFFL-201ENST00000315249 FUT4P22083 530 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ITGB7P26010 798 aa13□□□□□ -0.33
RFFL-201ENST00000315249 TMEM240Q5SV17 173 aa13□□□□□ -0.33
RFFL-201ENST00000315249 TMEM107Q6UX40 140 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ANKFN1Q8N957 763 aa13□□□□□ -0.33
RFFL-201ENST00000315249 C1QTNF1Q9BXJ1 281 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
RFFL-201ENST00000315249 H7C0S8 307 aa13□□□□□ -0.33
RFFL-201ENST00000315249 RLN1P04808 185 aa13□□□□□ -0.33
RFFL-201ENST00000315249 GPIP06744 558 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
RFFL-201ENST00000315249 VN1R2Q8NFZ6 395 aa13□□□□□ -0.33
RFFL-201ENST00000315249 SPPL3Q8TCT6 385 aa13□□□□□ -0.33
RFFL-201ENST00000315249 CRB3Q9BUF7 120 aa13□□□□□ -0.33
RFFL-201ENST00000315249 BOCQ9BWV1 1114 aa13□□□□□ -0.33
RFFL-201ENST00000315249 MEAF6Q9HAF1 191 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
RFFL-201ENST00000315249 PNPLA3Q9NST1 481 aa13□□□□□ -0.33
RFFL-201ENST00000315249 UBE2QL1A1L167 161 aa13□□□□□ -0.33
RFFL-201ENST00000315249 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PDYNP01213 254 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PGGT1BP53609 377 aa13□□□□□ -0.33
RFFL-201ENST00000315249 RAB25P57735 213 aa13□□□□□ -0.33
RFFL-201ENST00000315249 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
RFFL-201ENST00000315249 NUP43Q8NFH3 380 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms