RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CLNKQ7Z7G1 428 aa9□□□□□ -0.97
RFX3-201ENST00000302303 BPHLQ86WA6 291 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 DDIASQ8IXT1 998 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TBC1D19Q8N5T2 526 aa9□□□□□ -0.97
RFX3-201ENST00000302303 C1orf52Q8N6N3 182 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 STON2Q8WXE9 905 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RERGQ96A58 199 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 SERPINI1Q99574 410 aa9□□□□□ -0.97
RFX3-201ENST00000302303 CCT7Q99832 543 aa9□□□□□ -0.97
RFX3-201ENST00000302303 STRADBQ9C0K7 418 aa9□□□□□ -0.97
RFX3-201ENST00000302303 EPN3Q9H201 632 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
RFX3-201ENST00000302303 DDX31Q9H8H2 851 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 SLC39A1Q9NY26 324 aa9□□□□□ -0.97
RFX3-201ENST00000302303 KCMF1Q9P0J7 381 aa9□□□□□ -0.97
RFX3-201ENST00000302303 DHCR7Q9UBM7 475 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 DCTN4Q9UJW0 460 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RARRES3Q9UL19 164 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SLC12A4Q9UP95 1085 aa9□□□□□ -0.97
RFX3-201ENST00000302303 EXO1Q9UQ84 846 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 DLGAP4Q9Y2H0 992 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PCDHGA3Q9Y5H0 932 aa9□□□□□ -0.97
RFX3-201ENST00000302303 FER1L5A0AVI2 2057 aa9□□□□□ -0.97
RFX3-201ENST00000302303 AKAP13Q12802 2813 aa9□□□□□ -0.97
RFX3-201ENST00000302303 A0A0A6YYD5 115 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ERI3O43414 337 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 TMPRSS11DO60235 418 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SNX3O60493 162 aa9□□□□□ -0.97
RFX3-201ENST00000302303 CRCPO75575 148 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GBAP04062 536 aa9□□□□□ -0.97
RFX3-201ENST00000302303 NTRK1P04629 796 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SLC35G6P0C7Q6 338 aa9□□□□□ -0.97
RFX3-201ENST00000302303 CD1EP15812 388 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ALOX12P18054 663 aa9□□□□□ -0.97
RFX3-201ENST00000302303 IL1RNP18510 177 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TACR1P25103 407 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ATP5A1P25705 553 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 ARFIP1P53367 373 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RGS1Q08116 209 aa9□□□□□ -0.97
RFX3-201ENST00000302303 EIF3IQ13347 325 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 GRM7Q14831 915 aa9□□□□□ -0.97
RFX3-201ENST00000302303 AP5B1Q2VPB7 878 aa9□□□□□ -0.97
RFX3-201ENST00000302303 LARP7Q4G0J3 582 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-201ENST00000302303 DEFB134Q4QY38 66 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GARNL3Q5VVW2 1013 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TMEM198Q66K66 360 aa9□□□□□ -0.97
RFX3-201ENST00000302303 OR4C11Q6IEV9 310 aa9□□□□□ -0.97
RFX3-201ENST00000302303 OGFOD2Q6N063 350 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RHBDD2Q6NTF9 364 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TLDC1Q6P9B6 456 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ZNF517Q6ZMY9 492 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 CHSY3Q70JA7 882 aa9□□□□□ -0.97
RFX3-201ENST00000302303 COX15Q7KZN9 410 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TIPARPQ7Z3E1 657 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 COMMD6Q7Z4G1 85 aa9□□□□□ -0.97
RFX3-201ENST00000302303 MTERF4Q7Z6M4 381 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 ZFAND4Q86XD8 727 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PPP1R3BQ86XI6 285 aa9□□□□□ -0.97
RFX3-201ENST00000302303 KIRREL3Q8IZU9 778 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GALNT15Q8N3T1 639 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ACOT4Q8N9L9 421 aa9□□□□□ -0.97
RFX3-201ENST00000302303 OR9A4Q8NGU2 314 aa9□□□□□ -0.97
RFX3-201ENST00000302303 OR8K5Q8NH50 307 aa9□□□□□ -0.97
RFX3-201ENST00000302303 WDR36Q8NI36 951 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 ZCCHC10Q8TBK6 192 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ACTRT2Q8TDY3 377 aa9□□□□□ -0.97
RFX3-201ENST00000302303 NUDT8Q8WV74 236 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ZDHHC19Q8WVZ1 309 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 CCT6BQ92526 530 aa9□□□□□ -0.97
RFX3-201ENST00000302303 UCN3Q969E3 161 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SLC45A3Q96JT2 553 aa9□□□□□ -0.97
RFX3-201ENST00000302303 EGLN2Q96KS0 407 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GBP5Q96PP8 586 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TAAR9Q96RI9 348 aa9□□□□□ -0.97
RFX3-201ENST00000302303 CCT8L2Q96SF2 557 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ELAC2Q9BQ52 826 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 C17orf62Q9BQA9 187 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TRIM55Q9BYV6 548 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ACTL8Q9H568 366 aa9□□□□□ -0.97
RFX3-201ENST00000302303 LRTM1Q9HBL6 345 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ASCL3Q9NQ33 180 aa9□□□□□ -0.97
RFX3-201ENST00000302303 CUTCQ9NTM9 273 aa9□□□□□ -0.97
RFX3-201ENST00000302303 C1orf109Q9NX04 203 aa9□□□□□ -0.97
RFX3-201ENST00000302303 FOXJ2Q9P0K8 574 aa9□□□□□ -0.97
RFX3-201ENST00000302303 KLHL14Q9P2G3 628 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ASB4Q9Y574 426 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PCDHGA8Q9Y5G5 932 aa9□□□□□ -0.97
RFX3-201ENST00000302303 A0A0A6YYC8 382 aaPredicted RBP8.99□□□□□ -0.97
RFX3-201ENST00000302303 TEX51A0A1B0GUA7 166 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 TRPC5OSA6NMA1 111 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 CDRT15L2A8MXV6 281 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 I3L1I5 382 aaPredicted RBP8.99□□□□□ -0.97
RFX3-201ENST00000302303 SGK494L7N484 410 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 TXNDC9O14530 226 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 ANKRD28O15084 1053 aa8.99□□□□□ -0.97
RFX3-201ENST00000302303 RGS14O43566 566 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms