RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HEBP1Q9NRV9 189 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 SLC25A37Q9NYZ2 338 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 SSR3Q9UNL2 185 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 INSL5Q9Y5Q6 135 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.52□□□□□ -0.24
SDC2-201ENST00000302190 TAPBPO15533 448 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 NOS3P29474 1203 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 IDUAP35475 653 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 NR4A2P43354 598 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 C9orf64Q5T6V5 341 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 C17orf64Q86WR6 236 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 TCAIMQ8N3R3 496 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 HUS1BQ8NHY5 278 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 CIDECQ96AQ7 238 aaPredicted RBP13.52□□□□□ -0.24
SDC2-201ENST00000302190 CMTM7Q96FZ5 175 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 FAM129BQ96TA1 746 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 FBXW2Q9UKT8 454 aa13.52□□□□□ -0.24
SDC2-201ENST00000302190 SOBPA7XYQ1 873 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
SDC2-201ENST00000302190 ACPPP15309 386 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 DCKP27707 260 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 ZNF675Q8TD23 568 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 RNF167Q9H6Y7 350 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 SARDHQ9UL12 918 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 FAM227AF5H4B4 570 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 J3KTA2 159 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 TLL1O43897 1013 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 RFPL2O75678 378 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 UGT2B17O75795 530 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 IQCCQ4KMZ1 466 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 KRT73Q86Y46 540 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 SDR16C5Q8N3Y7 309 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 LINC00597Q9H2U6 94 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 CCDC177Q9NQR7 707 aaPredicted RBP13.52□□□□□ -0.25
SDC2-201ENST00000302190 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
SDC2-201ENST00000302190 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
SDC2-201ENST00000302190 ZFC3H1O60293 1989 aaKnown RBP13.52□□□□□ -0.25
SDC2-201ENST00000302190 ZNF638Q14966 1978 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 TEX28O15482 410 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 LATO43561 262 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 CHRNB1P11230 501 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 MAT2AP31153 395 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■■■□□ 15.2
SDC2-201ENST00000302190 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 CTRCQ99895 268 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 ZCCHC3Q9NUD5 404 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 TBC1D14Q9P2M4 693 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 TAC3Q9UHF0 121 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 TRPS1Q9UHF7 1281 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 MMP20O60882 483 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 NR2F6P10588 404 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 TYRP14679 529 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 MASP1P48740 699 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 DEFB103AP81534 67 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 ZFP69Q49AA0 526 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 C5orf22Q49AR2 442 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 CCSMST1Q4G0I0 132 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 KRT74Q7RTS7 529 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 LRRC70Q7Z2Q7 622 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 KRT78Q8N1N4 520 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 KREMEN2Q8NCW0 462 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 ALPK1Q96QP1 1244 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 TUBA1CQ9BQE3 449 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 SLC29A3Q9BZD2 475 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 ZNF624Q9P2J8 865 aaPredicted RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 ALPK2Q86TB3 2170 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 CCDC182A6NF36 153 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 WNT9AO14904 365 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 PCCBP05166 539 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 PPIBP23284 216 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 CXorf57Q6NSI4 855 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 SPRED2Q7Z698 418 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 MMAAQ8IVH4 418 aaKnown RBP13.51□□□□□ -0.25
SDC2-201ENST00000302190 SLC43A3Q8NBI5 491 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 SUSD6Q92537 303 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 DSN1Q9H410 356 aa13.51□□□□□ -0.25
SDC2-201ENST00000302190 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 C7P10643 843 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 PRKACBP22694 351 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 PDHA2P29803 388 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CD83Q01151 205 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 PTSQ03393 145 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 TMEM115Q12893 351 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 KRR1Q13601 381 aaKnown RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 ZSWIM7Q19AV6 140 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 XKR7Q5GH72 579 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
SDC2-201ENST00000302190 LIPKQ5VXJ0 399 aa13.5□□□□□ -0.25
SDC2-201ENST00000302190 CPZQ66K79 652 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms