RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 APEX1P27695 318 aaKnown RBP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 KIR2DL3P43628 341 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MAN2A2P49641 1150 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 GAB1Q13480 694 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF57Q68EA5 555 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 VWA5B2Q8N398 1253 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 FAM109AQ8N4B1 249 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 USP7Q93009 1102 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 EPYCQ99645 322 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 GABARAPL3Q9BY60 117 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MKRN2Q9H000 416 aaKnown RBP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 FAM83DQ9H4H8 585 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 SLC32A1Q9H598 525 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 KLK4Q9Y5K2 254 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 A0A0B4J293 547 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MGAT4DA6NG13 374 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 DRGXA6NNA5 263 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MYL12BO14950 172 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 PLOD3O60568 738 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 ZNF780AO75290 641 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 RPS3P23396 243 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 FAPQ12884 760 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 HYAL2Q12891 473 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 SPHARQ15513 63 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 CCL15Q16663 113 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 SPDYE7PQ495Y7 208 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 CPTPQ5TA50 214 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 HS6ST3Q8IZP7 471 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 RNF31Q96EP0 1072 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 HHATLQ9HCP6 504 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 GADD45GO95257 159 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 CSF3P09919 207 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 SRCP12931 536 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 ANXA8P13928 327 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 TNNI3P19429 210 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 PRPS1L1P21108 318 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 C5orf22Q49AR2 442 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 IFI44LQ53G44 452 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 XKR6Q5GH73 641 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 PLAG1Q6DJT9 500 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 ATCAYQ86WG3 371 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 IQCF1Q8N6M8 205 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 NLGN4YQ8NFZ3 816 aaPredicted RBP14.1□□□□□ -0.15
COL6A2-201ENST00000300527 FRG2BQ96QU4 278 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 MCUBQ9NWR8 336 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 TMPRSS11EQ9UL52 423 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 RIMKLBQ9ULI2 386 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 BRWD3Q6RI45 1802 aa14.1□□□□□ -0.15
COL6A2-201ENST00000300527 GJB5O95377 273 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 AMD1P17707 334 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 IL1RNP18510 177 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 CRYBA2P53672 197 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 PTPN5P54829 565 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 DUSP4Q13115 394 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 TJAP1Q5JTD0 557 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 USP30Q70CQ3 517 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 PLEKHH3Q7Z736 793 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 C1orf52Q8N6N3 182 aaKnown RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ARPC5LQ9BPX5 153 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 NTMT1Q9BV86 223 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 TTLL2Q9BWV7 592 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ALG5Q9Y673 324 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 MYADML2A6NDP7 307 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 PSPHP78330 225 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 RNF130Q86XS8 419 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 RNF170Q96K19 258 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 SUSD3Q96L08 255 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ACOXLQ9NUZ1 547 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 PCDHB11Q9Y5F2 797 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 SPIN1Q9Y657 262 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 LOC102723532A0A0G2JNH3 316 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ACSL4O60488 711 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ANXA4P09525 319 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 CYP2A6P11509 494 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 GPX2P18283 190 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 EPORP19235 508 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 SDC2P34741 201 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 SLC11A2P49281 568 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 NFATC2Q13469 925 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 LARS2Q15031 903 aaKnown RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 MICAQ29983 383 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 WSCD2Q2TBF2 565 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 MEX3DQ86XN8 651 aaKnown RBP14.09□□□□□ -0.15
COL6A2-201ENST00000300527 TCEANCQ8N8B7 351 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 LMNTD1Q8N9Z9 388 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 DENND6BQ8NEG7 585 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 DNAJB8Q8NHS0 232 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 ASIC4Q96FT7 647 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 LINC00597Q9H2U6 94 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 GALNT9Q9HCQ5 603 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 FLRT1Q9NZU1 646 aa14.09□□□□□ -0.15
COL6A2-201ENST00000300527 TMEM88BA6NKF7 163 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms