RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
PCBD1-201ENST00000299299 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
PCBD1-201ENST00000299299 CDYL2Q8N8U2 506 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 APOBEC4Q8WW27 367 aaKnown RBP12.86□□□□□ -0.35
PCBD1-201ENST00000299299 MAGEB10Q96LZ2 347 aaPredicted RBP12.86□□□□□ -0.35
PCBD1-201ENST00000299299 OR2A5Q96R48 311 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 KCNA7Q96RP8 456 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 ZFYVE21Q9BQ24 234 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 SLC29A3Q9BZD2 475 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 SLC25A18Q9H1K4 315 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 CCDC134Q9H6E4 229 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
PCBD1-201ENST00000299299 RAP2CQ9Y3L5 183 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 CROCCQ5TZA2 2017 aa12.86□□□□□ -0.35
PCBD1-201ENST00000299299 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 A0A0J9YVX5 310 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 TMEM233B4DJY2 109 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 FFAR3O14843 346 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 GPR42O15529 346 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 OR1F1O43749 312 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 CAPN1P07384 714 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 FGF4P08620 206 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 GRK3P35626 688 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 AHRP35869 848 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 RPS15AP62244 130 aaKnown RBP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 NCF4Q15080 339 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 UGT8Q16880 541 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 C1orf189Q5VU69 101 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 ADNP2Q6IQ32 1131 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 ZNF781Q8N8C0 355 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 OR7G3Q8NG95 312 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 WDR20Q8TBZ3 569 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 C7orf26Q96N11 449 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 ILKAPQ9H0C8 392 aaPredicted RBP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 SLCO1B3Q9NPD5 702 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 DHCR7Q9UBM7 475 aaKnown RBP12.85□□□□□ -0.35
PCBD1-201ENST00000299299 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 PLCL2Q9UPR0 1127 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 TIMM22Q9Y584 194 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 PCDHGA11Q9Y5H2 935 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 KCNMB2Q9Y691 235 aa12.85□□□□□ -0.35
PCBD1-201ENST00000299299 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 TCP11X1B4DZS4 312 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 C9J4A7 227 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 H0YGG7 62 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 MANBAO00462 879 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 AZIN1O14977 448 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 HBQ1P09105 142 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 RAB40ALP0C0E4 278 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 UROSP10746 265 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 RPL14P50914 215 aaKnown RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 ARF3P61204 181 aaPredicted RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 RBBP5Q15291 538 aaKnown RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 UGT3A2Q3SY77 523 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 ZC3H12BQ5HYM0 836 aaKnown RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 TCHHL1Q5QJ38 904 aaPredicted RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 SH2D4BQ5SQS7 431 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 CPZQ66K79 652 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 FRMPD2BQ6IN97 320 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 RHBDD2Q6NTF9 364 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 VN1R5Q7Z5H4 357 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 VN1R4Q7Z5H5 301 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 MCATQ8IVS2 390 aaKnown RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 TBC1D19Q8N5T2 526 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 C9orf43Q8TAL5 461 aaPredicted RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 PROKR1Q8TCW9 393 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 UBE2E3Q969T4 207 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 GBP5Q96PP8 586 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 NLNQ9BYT8 704 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 RHBGQ9H310 441 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 ZFP69BQ9UJL9 534 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 SRPK3Q9UPE1 567 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 FARSAQ9Y285 508 aaKnown RBP12.84□□□□□ -0.35
PCBD1-201ENST00000299299 TRAF6Q9Y4K3 522 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 AP1M2Q9Y6Q5 423 aa12.84□□□□□ -0.35
PCBD1-201ENST00000299299 SPENQ96T58 3664 aaKnown RBP12.83□□□□□ -0.36
PCBD1-201ENST00000299299 DNAJB5O75953 348 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms