RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CYP2S1Q96SQ9 504 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ADAP2Q9NPF8 381 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 DNAJC27Q9NZQ0 273 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 NWD2Q9ULI1 1742 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 NFAT5O94916 1531 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 FAM230AA0A1W2PPH8 454 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 FAM170BA6NMN3 283 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 J3QRK9 145 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 GTF2IRD2BQ6EKJ0 949 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 OR4F3Q6IEY1 312 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 GTF2IRD2Q86UP8 949 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 NUDT13Q86X67 352 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TRUB1Q8WWH5 349 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 FCAMRQ8WWV6 532 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 FBXL8Q96CD0 374 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TREX2Q9BQ50 279 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 CERS4Q9HA82 394 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SCP2D1Q9UJQ7 156 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 COL3A1P02461 1466 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 MYH7P12883 1935 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 A0A0J9YVX5 310 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 JUNP05412 331 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 HTR1AP08908 422 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 BMP8BP34820 402 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 GMPRP36959 345 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 MBOAT1Q6ZNC8 495 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 BMP8AQ7Z5Y6 402 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 HAVCR2Q8TDQ0 301 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ARL11Q969Q4 196 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 RPL10LQ96L21 214 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 HYLS1Q96M11 299 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 C8orf33Q9H7E9 229 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TRBC2A0A5B9 178 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TUBAL3A6NHL2 446 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 DUXAA6NLW8 204 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 B4DGG1 531 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 LRRN3E7EW58 273 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 K7EPI3 171 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SCAF4O95104 1147 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 POP4O95707 220 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 MRPL3P09001 348 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 XRCC1P18887 633 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 LINC00299Q6ZSB3 139 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 WDR53Q7Z5U6 358 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ARL14EPQ8N8R7 260 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 OR10Q1Q8NGQ4 319 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 OR10R2Q8NGX6 335 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SPPL2BQ8TCT7 592 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ASB13Q8WXK3 278 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 LRRC58Q96CX6 371 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 LRRN3Q9H3W5 708 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 RNF6Q9Y252 685 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ITM2AO43736 263 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 B4GALT4O60513 344 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 PDYNP01213 254 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 CSKP41240 450 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 RNF144AP50876 292 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 NKX6-1P78426 367 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SAMD12Q8N8I0 201 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 WDSUB1Q8N9V3 476 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SLC22A8Q8TCC7 542 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ELP5Q8TE02 316 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 CASTOR1Q8WTX7 329 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 FKBP10Q96AY3 582 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TMEM74Q96NL1 305 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 OR51I1Q9H343 314 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 CA5BQ9Y2D0 317 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 C17orf113A0A1B0GUU1 675 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 GABRDO14764 452 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 EEF1E1O43324 174 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 CCNOP22674 350 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 RPS3P23396 243 aaKnown RBP eCLIP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 HNRNPH3P31942 346 aaKnown RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 PTGIRP43119 386 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ASPAP45381 313 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 BDH1Q02338 343 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 COTL1Q14019 142 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ABHD15Q6UXT9 468 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ZNF572Q7Z3I7 529 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 PLA2G15Q8NCC3 412 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 PNPLA2Q96AD5 504 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ESAMQ96AP7 390 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 WDR77Q9BQA1 342 aaPredicted RBP5.39□□□□□ -1.55
CPSF2-201ENST00000298875 ATG5Q9H1Y0 275 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 TMEM185BQ9H7F4 350 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
CPSF2-201ENST00000298875 SMIM28A0A1B0GU29 152 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TVP23AA6NH52 213 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TTLL8A6PVC2 850 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 XPNPEP2O43895 674 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 NPPAP01160 153 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ADRA1BP35368 520 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ADH7P40394 386 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 SLC15A3Q8IY34 581 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 C1orf52Q8N6N3 182 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms