RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SRRM3A6NNA2 597 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 POLR1CO15160 346 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 BRINP1O60477 761 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM63AO94886 807 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 DHFRP00374 187 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 OPN1SWP03999 348 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 GSTT2BP0CG30 244 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 RAP2AP10114 183 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ANXA8P13928 327 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 OR12D2P58182 307 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 DLX2Q07687 328 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 DEFB134Q4QY38 66 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SPIN3Q5JUX0 258 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 RBM20Q5T481 1227 aaKnown RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 LINGO2Q7L985 606 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM17Q86X19 198 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TCEAL8Q8IYN2 117 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CCDC116Q8IYX3 515 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF283Q8N7M2 679 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 NXPE2Q96DL1 559 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CENPNQ96H22 339 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CD180Q99467 661 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 HCFC1R1Q9NWW0 138 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SLCO3A1Q9UIG8 710 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 FBXO9Q9UK97 447 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 STYXL1Q9Y6J8 313 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SIGLEC1Q9BZZ2 1709 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SHOX2O60902 331 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SEMA3DO95025 777 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 EPOP01588 193 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 AHSGP02765 367 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PGRP06401 933 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CD72P21854 359 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CD6P30203 668 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SLC6A6P31641 620 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 RORAP35398 523 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 MECP2P51608 486 aaKnown RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 NSDHLQ15738 373 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 LIPJQ5W064 366 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PGBD2Q6P3X8 592 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 RTL10Q7L3V2 364 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF761Q86XN6 746 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.348e-8■■■■□ 21.7
GAPVD1-202ENST00000297933 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CASD1Q96PB1 797 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PKP4Q99569 1192 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 DPH7Q9BTV6 452 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TMLHEQ9NVH6 421 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TCRBV7S3A2A0A539 114 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 LCHNA4D1U4 455 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 BEST1O76090 585 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CHRM1P11229 460 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ACSL1P33121 698 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF763Q0D2J5 394 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 CRTC2Q53ET0 693 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 IDNKQ5T6J7 187 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 FIGLAQ6QHK4 219 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 NPAS3Q8IXF0 933 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SDR16C5Q8N3Y7 309 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PEX11GQ96HA9 241 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 TOX2Q96NM4 488 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 SLC2A13Q96QE2 648 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 LRRC3Q9BY71 257 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 AKTIPQ9H8T0 292 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 FAM120CQ9NX05 1096 aaKnown RBP6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 ZIM2Q9NZV7 527 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 LGALS13Q9UHV8 139 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 PCDHB14Q9Y5E9 798 aa6.68□□□□□ -1.34
GAPVD1-202ENST00000297933 A0A1B0GVT2 93 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 C11orf98E9PRG8 122 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 HSPA12AO43301 675 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 NADKO95544 446 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 XIAPP98170 497 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 PITPNAQ00169 270 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 COL9A3Q14050 684 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 PON3Q15166 354 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 FAM189A2Q15884 450 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 IQCCQ4KMZ1 466 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 NCEH1Q6PIU2 408 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 PAMR1Q6UXH9 720 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 GPRIN1Q7Z2K8 1008 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 CLIP4Q8N3C7 705 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF565Q8N9K5 539 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 BOLLQ8N9W6 283 aaKnown RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 OR2L8Q8NGY9 312 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 MCFD2Q8NI22 146 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 SLC35B2Q8TB61 432 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 FRS2Q8WU20 508 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF689Q96CS4 500 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 LPAR4Q99677 370 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM121BQ9BXQ6 578 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 CXorf56Q9H5V9 222 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 TAS2R7Q9NYW3 318 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 DNAJB9Q9UBS3 223 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 ACAD8Q9UKU7 415 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 FEZF1A0PJY2 475 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 SH3PXD2BA1X283 911 aa6.67□□□□□ -1.34
GAPVD1-202ENST00000297933 GJE1A6NN92 205 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms