RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 HCN3Q9P1Z3 774 aa10.67□□□□□ -0.7
PBRM1-201ENST00000296302 CEPT1Q9Y6K0 416 aa10.67□□□□□ -0.7
PBRM1-201ENST00000296302 SMIM30A4D0T7 59 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 PRAMEF11O60813 436 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 BCAS1O75363 584 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NFATC1O95644 943 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 STSP08842 583 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TAS2R50P59544 299 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 E2F1Q01094 437 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ABCA11PQ4W5N1 156 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 RNF130Q86XS8 419 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ARL14EPQ8N8R7 260 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SHKBP1Q8TBC3 707 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NXPE2Q96DL1 559 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ERVK13-1Q9NX77 482 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 RABL2AQ9UBK7 228 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 FBXO9Q9UK97 447 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 RABL2BQ9UNT1 228 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NRP1O14786 923 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 AXIN1O15169 862 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 AOC2O75106 756 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 UBXN7O94888 489 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NPR2P20594 1047 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CLCN7P51798 805 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 FAAH2Q6GMR7 532 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ANKRD26P1Q6NSI1 321 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NOXRED1Q6NXP6 359 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 AGTRAPQ6RW13 159 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 IGFN1Q86VF2 1251 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CARM1Q86X55 608 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CEP97Q8IW35 865 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 RGL4Q8IZJ4 473 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 GDPD1Q8N9F7 314 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 PROKR2Q8NFJ6 384 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 FCAMRQ8WWV6 532 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TCEAL4Q96EI5 215 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NSUN5Q96P11 429 aaKnown RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 REEP4Q9H6H4 257 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TMEM45AQ9NWC5 275 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TAS2R3Q9NYW6 316 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SCML2Q9UQR0 700 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SH3D21A4FU49 640 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NME4O00746 187 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CDC40O60508 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 UPK1BO75841 260 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TBX18O95935 607 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 VAMP1P23763 118 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CRISP1P54107 249 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SNAP47Q5SQN1 464 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 HSDL2Q6YN16 418 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TICAM1Q8IUC6 712 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 YIPF7Q8N8F6 280 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ARMC5Q96C12 935 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 COQ8BQ96D53 544 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 XYLT2Q9H1B5 865 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SLC39A1Q9NY26 324 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TLX3O43711 291 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 DUSP11O75319 330 aaKnown RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CSN2P05814 226 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CKMT1AP12532 417 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CCL23P55773 120 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CTBP2P56545 445 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 CAP1Q01518 475 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 UBE2Q1Q7Z7E8 422 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 TMED4Q7Z7H5 227 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 OR10T2Q8NGX3 314 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF471Q9BX82 626 aaPredicted RBP10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF350Q9GZX5 532 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 ABCG5Q9H222 651 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 PCDHGB2Q9Y5G2 931 aa10.66□□□□□ -0.7
PBRM1-201ENST00000296302 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 KDELR3O43731 214 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 SELPP16109 830 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF20P17024 532 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 UQCRC2P22695 453 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 GADD45AP24522 165 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 PRKCDQ05655 676 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 PON2Q15165 354 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 GPR68Q15743 365 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 EXOC3L2Q2M3D2 409 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 C1orf220Q5T0J3 134 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 KANK2Q63ZY3 851 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 LRRN1Q6UXK5 716 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 MSANTD1Q6ZTZ1 278 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 WDTC1Q8N5D0 677 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 CLDN19Q8N6F1 224 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 TFAP2CQ92754 450 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 SUSD3Q96L08 255 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 TM9SF2Q99805 663 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 SMOQ99835 787 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 TP63Q9H3D4 680 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-201ENST00000296302 BEX1Q9HBH7 125 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 COPZ2Q9P299 210 aa10.65□□□□□ -0.7
PBRM1-201ENST00000296302 RHCGQ9UBD6 479 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms