RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TMPRSS11BQ86T26 416 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 TRPV3Q8NET8 790 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 WDR83Q9BRX9 315 aaKnown RBP18.38■□□□□ 0.53
CXCL3-201ENST00000296026 RHBGQ9H310 441 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 CLK4Q9HAZ1 481 aaKnown RBP18.38■□□□□ 0.53
CXCL3-201ENST00000296026 SLC22A14Q9Y267 594 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 TEX264Q9Y6I9 313 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 ABCA12Q86UK0 2595 aa18.38■□□□□ 0.53
CXCL3-201ENST00000296026 TCRBV16S1A1N1A0A5B0 115 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SAGE2PA6NJ88 616 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 PSMD12O00232 456 aaPredicted RBP18.37■□□□□ 0.53
CXCL3-201ENST00000296026 CDC7O00311 574 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 CDK2AP1O14519 115 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 ASNA1O43681 348 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SLC25A12O75746 678 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SNRPB2P08579 225 aaKnown RBP18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SMIM10L1P0DMW3 83 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 RNH1P13489 461 aaKnown RBP18.37■□□□□ 0.53
CXCL3-201ENST00000296026 CYB561P49447 251 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SMSP52788 366 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 STEAP4Q687X5 459 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SIAH3Q8IW03 269 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 ADAMTS18Q8TE60 1221 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 LRRC39Q96DD0 335 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 SMIM10Q96HG1 83 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 KLHL31Q9H511 634 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 PRDM9Q9NQV7 894 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 ZFATQ9P243 1243 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 PSAT1Q9Y617 370 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 KCNE2Q9Y6J6 123 aa18.37■□□□□ 0.53
CXCL3-201ENST00000296026 IGKV3D-11A0A0A0MRZ8 115 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NPEPPSL1A6NEC2 478 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 A8MUA0 341 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 C4orf51C9J302 202 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NME2P1O60361 137 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 COX6B1P14854 86 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
CXCL3-201ENST00000296026 AGAP20933 346 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NME2P22392 152 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 ELAVL4P26378 380 aaKnown RBP18.36■□□□□ 0.53
CXCL3-201ENST00000296026 PTGER4P35408 488 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 MLF1P58340 268 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 TOR1AIP1Q5JTV8 583 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 ZNF227Q86WZ6 799 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 ANKMY2Q8IV38 441 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 KLHL7Q8IXQ5 586 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NKAPQ8N5F7 415 aaKnown RBP18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NFAM1Q8NET5 270 aaPredicted RBP18.36■□□□□ 0.53
CXCL3-201ENST00000296026 EGFL8Q99944 293 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 TRIM51Q9BSJ1 452 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 NECTIN3Q9NQS3 549 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 MEMO1Q9Y316 297 aa18.36■□□□□ 0.53
CXCL3-201ENST00000296026 ZNHIT1O43257 154 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 SERPINA6P08185 405 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ABOP16442 354 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ZNF24P17028 368 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ITGA8P53708 1063 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ARL4CP56559 192 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 HSF1Q00613 529 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 MGAT5Q09328 741 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ZNF460Q14592 562 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 RNFT1Q5M7Z0 435 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 SYDE1Q6ZW31 735 aaPredicted RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 GDF7Q7Z4P5 450 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ZC3HC1Q86WB0 502 aaKnown RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 CA13Q8N1Q1 262 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 GHDCQ8N2G8 530 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 CPSF7Q8N684 471 aaKnown RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ARMC2Q8NEN0 867 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 CREB3L4Q8TEY5 395 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 ANKRD7Q92527 254 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 DEFB126Q9BYW3 111 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 AICDAQ9GZX7 198 aa18.35■□□□□ 0.53
CXCL3-201ENST00000296026 TRIM45Q9H8W5 580 aaPredicted RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 TRMT1Q9NXH9 659 aaKnown RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 NCOA6Q14686 2063 aaPredicted RBP18.35■□□□□ 0.53
CXCL3-201ENST00000296026 FAM95CA0A1B0GW59 222 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 FCHO1O14526 889 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 TRHRP34981 398 aaPredicted RBP18.34■□□□□ 0.53
CXCL3-201ENST00000296026 HLCSP50747 726 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 CDKL1Q00532 357 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 DR1Q01658 176 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 FRG1Q14331 258 aaKnown RBP18.34■□□□□ 0.53
CXCL3-201ENST00000296026 NCCRP1Q6ZVX7 275 aaPredicted RBP18.34■□□□□ 0.53
CXCL3-201ENST00000296026 TMEM125Q96AQ2 219 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 CAPZA3Q96KX2 299 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 OARD1Q9Y530 152 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 APCP25054 2843 aa18.34■□□□□ 0.53
CXCL3-201ENST00000296026 WDR47O94967 919 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 C1GALT1C1LP0DN25 315 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 GDF5P43026 501 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 HNMTP50135 292 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 TAS2R39P59534 338 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 STXBP1P61764 594 aaKnown RBP18.33■□□□□ 0.52
CXCL3-201ENST00000296026 BTN3A2P78410 334 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 CDSNQ15517 529 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 C18orf21Q32NC0 220 aaPredicted RBP18.33■□□□□ 0.52
CXCL3-201ENST00000296026 FRA10AC1Q70Z53 315 aa18.33■□□□□ 0.52
CXCL3-201ENST00000296026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms