RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SLC26A5P58743 744 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 RPS15AP62244 130 aaKnown RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 TBPL1P62380 186 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 NAE1Q13564 534 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 THOC5Q13769 683 aaKnown RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 PTK6Q13882 451 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 USP10Q14694 798 aaKnown RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 ABRAXAS2Q15018 415 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 NSDHLQ15738 373 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 EXT1Q16394 746 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 TTLL9Q3SXZ7 439 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 KRTCAP3Q53RY4 240 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 ASPGQ86U10 573 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 CTAGE6Q86UF2 777 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 GAS2L3Q86XJ1 694 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 ANKMY2Q8IV38 441 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 CEP97Q8IW35 865 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 CPSF7Q8N684 471 aaKnown RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 CAMKVQ8NCB2 501 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 EEF1AKMT1Q8WVE0 214 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 CCDC177Q9NQR7 707 aaPredicted RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 INTS10Q9NVR2 710 aaKnown RBP8.71□□□□□ -1.02
CNOT9-202ENST00000295701 LRFN1Q9P244 771 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 PDE10AQ9Y233 779 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.02
CNOT9-202ENST00000295701 A8MUA0 341 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 AP3B1O00203 1094 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 NDC80O14777 642 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 PFDN6O15212 129 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 CHST10O43529 356 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 B4GALT2O60909 372 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 ABOP16442 354 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 PAMP19021 973 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 TPP2P29144 1249 aaPredicted RBP8.7□□□□□ -1.02
CNOT9-202ENST00000295701 SSTR2P30874 369 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 BTG2P78543 158 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 CDK16Q00536 496 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 TLE4Q04727 773 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 GPS1Q13098 491 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 CAPN13Q6MZZ7 669 aaPredicted RBP8.7□□□□□ -1.02
CNOT9-202ENST00000295701 TTC27Q6P3X3 843 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 AGTRAPQ6RW13 159 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 C4orf22Q6V702 233 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 MEX3BQ6ZN04 569 aaKnown RBP8.7□□□□□ -1.02
CNOT9-202ENST00000295701 C17orf64Q86WR6 236 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 RPS19BP1Q86WX3 136 aaKnown RBP8.7□□□□□ -1.02
CNOT9-202ENST00000295701 TMEM178AQ8NBL3 297 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 ZNF740Q8NDX6 193 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 MCOLN3Q8TDD5 553 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 ELP5Q8TE02 316 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 SDCCAG3Q96C92 435 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 DMRTA2Q96SC8 542 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 NDNQ99608 321 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 LPAR4Q99677 370 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 AARSD1Q9BTE6 412 aaKnown RBP8.7□□□□□ -1.02
CNOT9-202ENST00000295701 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 SPNS1Q9H2V7 528 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 KLHL42Q9P2K6 505 aa8.7□□□□□ -1.02
CNOT9-202ENST00000295701 FREM3P0C091 2139 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 VPS13CQ709C8 3753 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 MTORP42345 2549 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 FAM237BA0A1B0GVD1 139 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SDR42E2A6NKP2 422 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 MAGEB17A8MXT2 336 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 CEP104O60308 925 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 NME2P1O60361 137 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 DIAPH2O60879 1101 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SLC25A12O75746 678 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 KRT14P02533 472 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SERPIND1P05546 499 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 ENO3P13929 434 aaPredicted RBP8.69□□□□□ -1.02
CNOT9-202ENST00000295701 NPPBP16860 134 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 NME2P22392 152 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 MAGEA6P43360 314 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 MLF1P58340 268 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 PHKG1Q16816 387 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 DEFB134Q4QY38 66 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 CATSPEREQ5SY80 951 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 RBM20Q5T481 1227 aaKnown RBP8.69□□□□□ -1.02
CNOT9-202ENST00000295701 CEP128Q6ZU80 1094 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 C8orf86Q6ZUL3 223 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 PCGF5Q86SE9 256 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 GHDCQ8N2G8 530 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 TXLNBQ8N3L3 684 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 RPRMLQ8N4K4 120 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 MARVELD2Q8N4S9 558 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 AFAP1L2Q8N4X5 818 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SLC5A8Q8N695 610 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 ACBD4Q8NC06 268 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 KCNJ9Q92806 393 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 PYCR2Q96C36 320 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SIGLEC10Q96LC7 697 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 PTCHD1Q96NR3 888 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 OR4K3Q96R72 315 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 SGPP1Q9BX95 441 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 UCK2Q9BZX2 261 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 AICDAQ9GZX7 198 aa8.69□□□□□ -1.02
CNOT9-202ENST00000295701 ENKD1Q9H0I2 346 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms