RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 DLX3O60479 287 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 DNAJB5O75953 348 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 PLATP00750 562 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 CHRNB2P17787 502 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 TLE2Q04725 743 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 NIPAL4Q0D2K0 466 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 NAPRTQ6XQN6 538 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 OR8S1Q8NH09 359 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 ALPK1Q96QP1 1244 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 TBL1XR1Q9BZK7 514 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 SRMSQ9H3Y6 488 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 RGCCQ9H4X1 137 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 GNG8Q9UK08 70 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 ZNF451Q9Y4E5 1061 aa10.41□□□□□ -0.74
PKNOX1-201ENST00000291547 HYKKA2RU49 373 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 HAS3O00219 553 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 VILLO15195 856 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 FLRT2O43155 660 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 APODP05090 189 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 DCKP27707 260 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 RBMXP38159 391 aaKnown RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 NOVP48745 357 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TCEANCQ8N8B7 351 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SAMD12Q8N8I0 201 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 NAT8LQ8N9F0 302 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SLCO2A1Q92959 643 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 PEX13Q92968 403 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TESCQ96BS2 214 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TCEAL4Q96EI5 215 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 CTRCQ99895 268 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TP63Q9H3D4 680 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ERVW-1Q9UQF0 538 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ERVK-19Q9WJR5 959 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 CXorf49A8MYA2 514 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 WASH3PC4AMC7 463 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 FAM189A1O60320 539 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 GLUD2P49448 558 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ABHD18Q0P651 414 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 FRG2Q64ET8 278 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ABHD15Q6UXT9 468 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SLC35B4Q969S0 331 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 RPL10LQ96L21 214 aaKnown RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 FRG2BQ96QU4 278 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 MKRN2Q9H000 416 aaKnown RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TMEM185BQ9H7F4 350 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 C14orf119Q9NWQ9 140 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 FZD10Q9ULW2 581 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SBF2Q86WG5 1849 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 BORCS7-ASMTA0A0B4J1R7 106 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 A0A1W2PP18 115 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 TVP23AA6NH52 213 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 M0R129 80 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ADAMTS3O15072 1205 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 CTBP2P56545 445 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 HERV-K104P61576 105 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 UFM1P61960 85 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SP3Q02447 781 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ZNF181Q2M3W8 571 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SH3PXD2AQ5TCZ1 1133 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 DNM1P34Q6PK57 102 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 RBM23Q86U06 439 aaKnown RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ZNF709Q8N972 641 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 SLC35B2Q8TB61 432 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 JPH3Q8WXH2 748 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 ARL6Q9H0F7 186 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 DPEP3Q9H4B8 488 aa10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 MRPS30Q9NP92 439 aaKnown RBP10.4□□□□□ -0.74
PKNOX1-201ENST00000291547 AGAP5A6NIR3 686 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 M0R2N6 131 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 E2F3O00716 465 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 HCKP08631 526 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 BCKDHAP12694 445 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 IL7P13232 177 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 ATP5A1P25705 553 aaKnown RBP10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 MAP2K3P46734 347 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 DAOAP59103 153 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 SEMG2Q02383 582 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 ST3GAL3Q11203 375 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 DUOXA1Q1HG43 343 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 PLEKHG7Q6ZR37 379 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 SPATC1Q76KD6 591 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 NFKBIDQ8NI38 313 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 SLC5A7Q9GZV3 580 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 OR10A4Q9H209 315 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 FBXW11Q9UKB1 542 aa10.4□□□□□ -0.75
PKNOX1-201ENST00000291547 CACNA1SQ13698 1873 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ICMTO60725 284 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 THEGLP0DJG4 465 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ZNF16P17020 682 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 PKLRP30613 574 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 BMP8BP34820 402 aa10.39□□□□□ -0.75
PKNOX1-201ENST00000291547 ARSFP54793 590 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms