RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TRIM44Q96DX7 344 aaPredicted RBP9.22□□□□□ -0.93
CCDC58-201ENST00000291458 TM4SF19Q96DZ7 209 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 CDC42EP4Q9H3Q1 356 aaKnown RBP9.22□□□□□ -0.93
CCDC58-201ENST00000291458 ZDHHC18Q9NUE0 388 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 ASF1BQ9NVP2 202 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 C5AR2Q9P296 337 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 DOPEY2Q9Y3R5 2298 aa9.22□□□□□ -0.93
CCDC58-201ENST00000291458 MYO18BQ8IUG5 2567 aa9.21□□□□□ -0.93
CCDC58-201ENST00000291458 MYOCOSA0A1B0GUC4 107 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 A8MUA0 341 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 A8MUI8 341 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 FAM227AF5H4B4 570 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 POC1B-GALNT4F8VUJ3 575 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ERI3O43414 337 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CHST10O43529 356 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MAN1A2O60476 641 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 GALR3O60755 368 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 H2AFYO75367 372 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 LTA4HP09960 611 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 C1GALT1C1LP0DN25 315 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 PCNAP12004 261 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 GNAZP19086 355 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MAOAP21397 527 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 HNRNPH1P31943 449 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 PHBP35232 272 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ARL1P40616 181 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 HNMTP50135 292 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 RNF144AP50876 292 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 PLA2G16P53816 162 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 OR4D2P58180 307 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 BTN3A2P78410 334 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ZNF33BQ06732 778 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 HYAL2Q12891 473 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MFAP5Q13361 173 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NAB1Q13506 487 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 DDX39BQ13838 428 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NSDHLQ15738 373 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SFT2D3Q587I9 215 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ISLR2Q6UXK2 745 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SLCO4C1Q6ZQN7 724 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CPEB2Q7Z5Q1 589 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CLNKQ7Z7G1 428 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MYLK4Q86YV6 388 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 GSPT2Q8IYD1 628 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MMGT1Q8N4V1 131 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 FAM47BQ8NA70 645 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 MNS1Q8NEH6 495 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 OR4K1Q8NGD4 311 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NT5CQ8TCD5 201 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 UTP15Q8TED0 518 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 KIAA1191Q96A73 305 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NXNL1Q96CM4 212 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SNRNP40Q96DI7 357 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CYTH2Q99418 400 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 FMO2Q99518 471 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SLC29A3Q9BZD2 475 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 TGIF2Q9GZN2 237 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 AICDAQ9GZX7 198 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ZNF700Q9H0M5 742 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 VPS11Q9H270 941 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SNX15Q9NRS6 342 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 ANKRD10Q9NXR5 420 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NUDT4Q9NZJ9 180 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 CPSF2Q9P2I0 782 aaKnown RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 C19orf25Q9UFG5 118 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-201ENST00000291458 NTNG1Q9Y2I2 539 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 SLC22A7Q9Y694 548 aa9.21□□□□□ -0.94
CCDC58-201ENST00000291458 DYTNA2CJ06 578 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 LRRC14BA6NHZ5 514 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 TCP11X1B4DZS4 312 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 PSMD12O00232 456 aaPredicted RBP9.2□□□□□ -0.94
CCDC58-201ENST00000291458 KLHL41O60662 606 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 PRAMEF4O60810 478 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 STK16O75716 305 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 AGFG2O95081 481 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 SERPINA7P05543 415 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 FHP07954 510 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 GFAPP14136 432 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 CD22P20273 847 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 CERS1P27544 350 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 AHRP35869 848 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 MSH2P43246 934 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 KCNC1P48547 511 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 SERPINB8P50452 374 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 SKP1P63208 163 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 BTG2P78543 158 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 RHAGQ02094 409 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 ACTN3Q08043 901 aaPredicted RBP9.2□□□□□ -0.94
CCDC58-201ENST00000291458 CHIT1Q13231 466 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 PWP1Q13610 501 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 DOC2AQ14183 400 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 ZNF169Q14929 603 aaPredicted RBP9.2□□□□□ -0.94
CCDC58-201ENST00000291458 EIF2S3LQ2VIR3 472 aaKnown RBP9.2□□□□□ -0.94
CCDC58-201ENST00000291458 CRB2Q5IJ48 1285 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 PRAMEF9Q5VWM5 478 aa9.2□□□□□ -0.94
CCDC58-201ENST00000291458 SULT1C3Q6IMI6 304 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms