RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PCDHB3Q9Y5E6 796 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 KLK4Q9Y5K2 254 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 ENTPD2Q9Y5L3 495 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 PRAMEF33A0A0G2JMD5 474 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 PRSS51A0A1B0GVH4 220 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 OR1F1O43749 312 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 DFNA5O60443 496 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 TBX19O60806 448 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 LRATO95237 230 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 CFIP05156 583 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 CD38P28907 300 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 WNT3P56703 355 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 TCEA2Q15560 299 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 SF1Q15637 639 aaKnown RBP14.67□□□□□ -0.06
COPS3-201ENST00000268717 PGS1Q32NB8 556 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 MTX3Q5HYI7 312 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 WLSQ5T9L3 541 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 CPTPQ5TA50 214 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 FAM71E1Q6IPT2 247 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 TRIM48Q8IWZ4 208 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 NATD1Q8N6N6 113 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 TRPV3Q8NET8 790 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 C16orf78Q8WTQ4 265 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 NUDT8Q8WV74 236 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 POP5Q969H6 163 aaKnown RBP14.67□□□□□ -0.06
COPS3-201ENST00000268717 GBP5Q96PP8 586 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 DUSP26Q9BV47 211 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 ZNF717Q9BY31 904 aaPredicted RBP14.67□□□□□ -0.06
COPS3-201ENST00000268717 VCX3BQ9H321 246 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 SLC6A20Q9NP91 592 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 SLC25A37Q9NYZ2 338 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 MAGEL2Q9UJ55 1249 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 SLC6A14Q9UN76 642 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 SLCO1B1Q9Y6L6 691 aa14.67□□□□□ -0.06
COPS3-201ENST00000268717 RNASET2O00584 256 aaKnown RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 PLPP1O14494 284 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 RFXANKO14593 260 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ARPC2O15144 300 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 VIPP01282 170 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CSF2P04141 144 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ZCCHC18P0CG32 403 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CTSEP14091 401 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 GNSP15586 552 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 SLC7A1P30825 629 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 TSFMP43897 325 aaKnown RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 TRA2BP62995 288 aaKnown RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 RELAQ04206 551 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CYP4F3Q08477 520 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ZIC1Q15915 447 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 HKDC1Q2TB90 917 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ADPRMQ3LIE5 342 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 OR4F3Q6IEY1 312 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ADCK2Q7Z695 626 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 PQLC1Q8N2U9 271 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 OR7A2PQ8NGA2 310 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 OR4E2Q8NGC2 313 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CREB3L4Q8TEY5 395 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 RGMAQ96B86 450 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CPPED1Q9BRF8 314 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 SPHK1Q9NYA1 384 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CPNE7Q9UBL6 633 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 C15orf41Q9Y2V0 281 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 PCDHB14Q9Y5E9 798 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 AP1M2Q9Y6Q5 423 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 TP53BP1Q12888 1972 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 FEZF1A0PJY2 475 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 GABRR3A8MPY1 467 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CDX4O14627 284 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 CAPN5O15484 640 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 NDUFS4O43181 175 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 TNFSF14O43557 240 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 AKAP10O43572 662 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 BAG2O95816 211 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 KLK1P06870 262 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 UMPSP11172 480 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 PIM1P11309 404 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 NME1P15531 152 aaKnown RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 ENGP17813 658 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 ATP6V1B2P21281 511 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 TPP2P29144 1249 aaPredicted RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 BSGP35613 385 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 SESN3P58005 492 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 MTPNP58546 118 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 MAP7Q14244 749 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 CMPK2Q5EBM0 449 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 PRRT3Q5FWE3 981 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 TAF8Q7Z7C8 310 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 NUDT13Q86X67 352 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 SDR16C5Q8N3Y7 309 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 MFSD9Q8NBP5 474 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 OR52E4Q8NGH9 312 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 C1orf216Q8TAB5 229 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 WDR48Q8TAF3 677 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 NRG4Q8WWG1 115 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 GFM2Q969S9 779 aaKnown RBP14.66□□□□□ -0.06
COPS3-201ENST00000268717 ECSITQ9BQ95 431 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 DPH7Q9BTV6 452 aa14.66□□□□□ -0.06
COPS3-201ENST00000268717 EFHD1Q9BUP0 239 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms