RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PWP1Q13610 501 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 NKAIN1Q4KMZ8 207 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 ATG14Q6ZNE5 492 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 COX15Q7KZN9 410 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 SPACA3Q8IXA5 215 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 LRFN5Q96NI6 719 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 RHBGQ9H310 441 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 IL17BQ9UHF5 180 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 TIMM22Q9Y584 194 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 SGK494L7N484 410 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 TXNDC9O14530 226 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 CAPN1P07384 714 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 TCN2P20062 427 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 HTR6P50406 440 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 RPS13P62277 151 aaKnown RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 OLR1P78380 273 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 MAP7Q14244 749 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 DEFB134Q4QY38 66 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 ARHGAP40Q5TG30 622 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 NUDCD3Q8IVD9 361 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 PARP9Q8IXQ6 854 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 WDR20Q8TBZ3 569 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 PROKR1Q8TCW9 393 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 F2RL3Q96RI0 385 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 MS4A8Q9BY19 250 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 PITHD1Q9GZP4 211 aaPredicted RBP17.41■□□□□ 0.38
SDF4-201ENST00000263741 OR51B5Q9H339 312 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 DMRT3Q9NQL9 472 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 CTSFQ9UBX1 484 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 ZMIZ1Q9ULJ6 1067 aa17.41■□□□□ 0.38
SDF4-201ENST00000263741 EPG5Q9HCE0 2579 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 H0YIV9 168 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 RDH16O75452 317 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 CLEC3AO75596 197 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 MLYCDO95822 493 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 SERPINA6P08185 405 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 DCDP81605 110 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 GGTA1PQ4G0N0 100 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 YOD1Q5VVQ6 348 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 ZNF517Q6ZMY9 492 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 KDF1Q8NAX2 398 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 TTLQ8NG68 377 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 OR5T3Q8NGG3 340 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 AGR3Q8TD06 166 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 UTP15Q8TED0 518 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 UBE2E3Q969T4 207 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 ELAC2Q9BQ52 826 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 GPN2Q9H9Y4 310 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 HCN3Q9P1Z3 774 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 FIS1Q9Y3D6 152 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 NAALAD2Q9Y3Q0 740 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 PCDHGA11Q9Y5H2 935 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 MGAQ8IWI9 3026 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 LRIT2A6NDA9 550 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 CFAP73A6NFT4 308 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 ERI3O43414 337 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 CNOT3O75175 753 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 DNAJB6O75190 326 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 KLHL18O94889 574 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 ETHE1O95571 254 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 BGNP21810 368 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 PLA2G16P53816 162 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 CHI3L2Q15782 390 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 NDUFA9Q16795 377 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 MANEAQ5SRI9 462 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 GARNL3Q5VVW2 1013 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 FRG2Q64ET8 278 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 SHISA6Q6ZSJ9 500 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 TRPM8Q7Z2W7 1104 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 AMER3Q8N944 861 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 COL26A1Q96A83 441 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 MS4A6EQ96DS6 147 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 FRG2BQ96QU4 278 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 C17orf62Q9BQA9 187 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 SORBS1Q9BX66 1292 aaKnown RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 ZNF395Q9H8N7 513 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 IFT80Q9P2H3 777 aaPredicted RBP17.4■□□□□ 0.38
SDF4-201ENST00000263741 TRPS1Q9UHF7 1281 aa17.4■□□□□ 0.38
SDF4-201ENST00000263741 TMEM8BA6NDV4 472 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 RTCAO00442 366 aaKnown RBP17.39■□□□□ 0.37
SDF4-201ENST00000263741 LYPLA1O75608 230 aaPredicted RBP17.39■□□□□ 0.37
SDF4-201ENST00000263741 AGXTP21549 392 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 DNASE1L3Q13609 305 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 CLEC6AQ6EIG7 209 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 SCIMPQ6UWF3 145 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 PRSS58Q8IYP2 241 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 ENDOVQ8N8Q3 282 aaKnown RBP17.39■□□□□ 0.37
SDF4-201ENST00000263741 TACO1Q9BSH4 297 aaKnown RBP17.39■□□□□ 0.37
SDF4-201ENST00000263741 YIPF2Q9BWQ6 316 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 RBCK1Q9BYM8 510 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
SDF4-201ENST00000263741 ELOVL6Q9H5J4 265 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 YY1AP1Q9H869 796 aa17.39■□□□□ 0.37
SDF4-201ENST00000263741 ANKHQ9HCJ1 492 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms