RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 TRIM74Q86UV6 250 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TRIM73Q86UV7 250 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CEP76Q8TAP6 659 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 GRHL3Q8TE85 626 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 DNAJA4Q8WW22 397 aaPredicted RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 OTUB2Q96DC9 234 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 DPAGT1Q9H3H5 408 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CDC14AQ9UNH5 594 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MRPS17Q9Y2R5 130 aaKnown RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 CLCA3PQ9Y6N3 262 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 DLGAP1O14490 977 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 T-ENOLP0DO92 83 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 HK1P19367 917 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MATN1P21941 496 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CCKBRP32239 447 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 OR1E2P47887 323 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 GJA8P48165 433 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PM20D1Q6GTS8 502 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TP53INP2Q8IXH6 220 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 SDR16C5Q8N3Y7 309 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 OSTF1Q92882 214 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 NKD1Q969G9 470 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 FRMD6Q96NE9 622 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MNTQ99583 582 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 Q9N2J8 555 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 NLGN3Q9NZ94 848 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MYH14Q7Z406 1995 aaKnown RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 G3V2L1 256 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PLOD2O00469 737 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 LDB2O43679 373 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TRIM3O75382 744 aaPredicted RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 SLITRK5O94991 958 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 C1GALT1C1LP0DN25 315 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 UQCRC2P22695 453 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TIA1P31483 386 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD44-201ENST00000263398 OR12D2P58182 307 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 RPP38P78345 283 aaKnown RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 CAMK1Q14012 370 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 SLC36A4Q6YBV0 504 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 HSDL2Q6YN16 418 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 KRTCAP2Q8N6L1 136 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 GLYATL1Q969I3 302 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 L3HYPDHQ96EM0 354 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PGAP3Q96FM1 320 aaPredicted RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 ELOVL2Q9NXB9 296 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 TMEM5Q9Y2B1 443 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PCDHGB6Q9Y5F9 930 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PTGDR2Q9Y5Y4 395 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 GPR32O75388 356 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 PDYNP01213 254 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CXCR1P25024 350 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 EDNRAP25101 427 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 ACRV1P26436 265 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CLDN8P56748 225 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 SH3BP2P78314 561 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 SLC3A1Q07837 685 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 GINS1Q14691 196 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 OR52B6Q8NGF0 335 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 CNIH3Q8TBE1 160 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 LRRC20Q8TCA0 184 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MAPK15Q8TD08 544 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 ZNF675Q8TD23 568 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 POF1BQ8WVV4 589 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 OR5P2Q8WZ92 322 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 IGSF21Q96ID5 467 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 LRIG1Q96JA1 1093 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 ASPNQ9BXN1 380 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 SMOXQ9NWM0 555 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MS4A12Q9NXJ0 267 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 RHCGQ9UBD6 479 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 KCNK6Q9Y257 313 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 MYH15Q9Y2K3 1946 aa10.38□□□□□ -0.75
CD44-201ENST00000263398 EXOSC1Q9Y3B2 195 aaKnown RBP10.38□□□□□ -0.75
CD44-201ENST00000263398 COL18A1P39060 1754 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ZNF432O94892 652 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 CHRNA1P02708 482 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 BMP2P12643 396 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 JUPP14923 745 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 OR3A3P47888 321 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 OR3A2P47893 321 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 TAS2R43P59537 309 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 CD83Q01151 205 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MC1RQ01726 317 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 DNASE1L3Q13609 305 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 ABRAXAS2Q15018 415 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 DPY19L3Q6ZPD9 716 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 MCEMP1Q8IX19 187 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 OR8H3Q8N146 312 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 GHDCQ8N2G8 530 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 PROKR2Q8NFJ6 384 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 IRF7Q92985 503 aa10.37□□□□□ -0.75
CD44-201ENST00000263398 EPYCQ99645 322 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms