RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 TNRC18O15417 2968 aaPredicted RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 NARSO43776 548 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 EML2O95834 649 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 SPATS1Q496A3 300 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 PAGE2BQ5JRK9 111 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 CALHM3Q86XJ0 350 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 FAM47BQ8NA70 645 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 SH3GL1Q99961 368 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 APOOQ9BUR5 198 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 TPK1Q9H3S4 243 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 C2CD4DB7Z1M9 353 aa13□□□□□ -0.33
VMP1-201ENST00000262291 EPN2O95208 641 aa13□□□□□ -0.33
VMP1-201ENST00000262291 C6orf47O95873 294 aa13□□□□□ -0.33
VMP1-201ENST00000262291 PRKACGP22612 351 aa13□□□□□ -0.33
VMP1-201ENST00000262291 SRSF11Q05519 484 aaKnown RBP13□□□□□ -0.33
VMP1-201ENST00000262291 FOXD4Q12950 439 aaPredicted RBP13□□□□□ -0.33
VMP1-201ENST00000262291 BCL2A1Q16548 175 aa13□□□□□ -0.33
VMP1-201ENST00000262291 SMUG1Q53HV7 270 aa13□□□□□ -0.33
VMP1-201ENST00000262291 SPIN4Q56A73 249 aa13□□□□□ -0.33
VMP1-201ENST00000262291 FGD3Q5JSP0 725 aa13□□□□□ -0.33
VMP1-201ENST00000262291 DDX59Q5T1V6 619 aaKnown RBP eCLIP13□□□□□ -0.33
VMP1-201ENST00000262291 MTSS1LQ765P7 747 aa13□□□□□ -0.33
VMP1-201ENST00000262291 STK32CQ86UX6 486 aa13□□□□□ -0.33
VMP1-201ENST00000262291 GALNT13Q8IUC8 556 aa13□□□□□ -0.33
VMP1-201ENST00000262291 LAS2Q8IYD9 372 aa13□□□□□ -0.33
VMP1-201ENST00000262291 OR4A15Q8NGL6 344 aa13□□□□□ -0.33
VMP1-201ENST00000262291 C16orf78Q8WTQ4 265 aa13□□□□□ -0.33
VMP1-201ENST00000262291 UCN3Q969E3 161 aa13□□□□□ -0.33
VMP1-201ENST00000262291 TSACCQ96A04 125 aaPredicted RBP13□□□□□ -0.33
VMP1-201ENST00000262291 HHIPQ96QV1 700 aa13□□□□□ -0.33
VMP1-201ENST00000262291 MENTQ9BUN1 341 aa13□□□□□ -0.33
VMP1-201ENST00000262291 SMURF2Q9HAU4 748 aa13□□□□□ -0.33
VMP1-201ENST00000262291 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
VMP1-201ENST00000262291 A0A1W2PPV9 198 aa13□□□□□ -0.33
VMP1-201ENST00000262291 EVPLLA8MZ36 301 aa13□□□□□ -0.33
VMP1-201ENST00000262291 NPIPB8E9PQR5 432 aa13□□□□□ -0.33
VMP1-201ENST00000262291 NOBOXO60393 691 aa13□□□□□ -0.33
VMP1-201ENST00000262291 H6PDO95479 791 aa13□□□□□ -0.33
VMP1-201ENST00000262291 TBX6O95947 436 aaPredicted RBP13□□□□□ -0.33
VMP1-201ENST00000262291 UMPSP11172 480 aa13□□□□□ -0.33
VMP1-201ENST00000262291 ALDH3B2P48448 385 aa13□□□□□ -0.33
VMP1-201ENST00000262291 VAC14Q08AM6 782 aa13□□□□□ -0.33
VMP1-201ENST00000262291 VTCN1Q7Z7D3 282 aa13□□□□□ -0.33
VMP1-201ENST00000262291 HORMAD1Q86X24 394 aa13□□□□□ -0.33
VMP1-201ENST00000262291 OXR1Q8N573 874 aa13□□□□□ -0.33
VMP1-201ENST00000262291 PAPD5Q8NDF8 572 aaKnown RBP13□□□□□ -0.33
VMP1-201ENST00000262291 REPS1Q96D71 796 aa13□□□□□ -0.33
VMP1-201ENST00000262291 PDXPQ96GD0 296 aa13□□□□□ -0.33
VMP1-201ENST00000262291 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
VMP1-201ENST00000262291 C9orf16Q9BUW7 83 aa13□□□□□ -0.33
VMP1-201ENST00000262291 OSBPL11Q9BXB4 747 aa13□□□□□ -0.33
VMP1-201ENST00000262291 TPT1P8Q9HAU6 139 aa13□□□□□ -0.33
VMP1-201ENST00000262291 RAPGEFL1Q9UHV5 662 aa13□□□□□ -0.33
VMP1-201ENST00000262291 CD207Q9UJ71 328 aa13□□□□□ -0.33
VMP1-201ENST00000262291 CNOT11Q9UKZ1 510 aaKnown RBP13□□□□□ -0.33
VMP1-201ENST00000262291 CORINQ9Y5Q5 1042 aa13□□□□□ -0.33
VMP1-201ENST00000262291 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
VMP1-201ENST00000262291 SNRNP200O75643 2136 aaKnown RBP13□□□□□ -0.33
VMP1-201ENST00000262291 FAM220BPB1ANY3 271 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 UPK1AO00322 258 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 GNGT2O14610 69 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 OR1F1O43749 312 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 LCMT2O60294 686 aaKnown RBP12.99□□□□□ -0.33
VMP1-201ENST00000262291 CST1P01037 141 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 IL3P08700 152 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 RAP2AP10114 183 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HSD3B1P14060 373 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 NAT1P18440 290 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HSD3B2P26439 372 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HPCAL1P37235 193 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 HSPA13P48723 471 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ALDH9A1P49189 494 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ZNF763Q0D2J5 394 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 RPA4Q13156 261 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 PLCL1Q15111 1095 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 MPEG1Q2M385 716 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 COX20Q5RI15 118 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ENPP7Q6UWV6 458 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 GPR141Q7Z602 305 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 FAM129CQ86XR2 697 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 AMER3Q8N944 861 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 BORCS5Q969J3 196 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 MRGPRX1Q96LB2 322 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 CCDC115Q96NT0 180 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 GABRG3Q99928 467 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 NAA50Q9GZZ1 169 aaKnown RBP12.99□□□□□ -0.33
VMP1-201ENST00000262291 BTBD1Q9H0C5 482 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 WASHC1A8K0Z3 465 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 RASAL1O95294 804 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 ACPPP15309 386 aa12.99□□□□□ -0.33
VMP1-201ENST00000262291 NDUFV2P19404 249 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms