RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 ANKDD1BA6NHY2 528 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 KIR2DS3K7RE56 304 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 SAP18O00422 153 aaKnown RBP16.66■□□□□ 0.26
SRSF1-201ENST00000258962 NME4O00746 187 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 MAP3K7O43318 606 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 MYO1DO94832 1006 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 LRATO95237 230 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 VIPP01282 170 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 IL6P05231 212 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 PGRP06401 933 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 GLB1P16278 677 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 ME2P23368 584 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 SLC6A2P23975 617 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 C21orf58P58505 322 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 PHC1P78364 1004 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 INSM1Q01101 510 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-201ENST00000258962 CCNIQ14094 377 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 KIR2DS5Q14953 304 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 PERM1Q5SV97 790 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 KIAA1614Q5VZ46 1190 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 PRMT9Q6P2P2 845 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 DLEU7Q6UYE1 221 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 COMMD6Q7Z4G1 85 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 ADCK2Q7Z695 626 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 PLD3Q8IV08 490 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 WDR48Q8TAF3 677 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 CCDC74AQ96AQ1 378 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 TESCQ96BS2 214 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 CCDC3Q9BQI4 270 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 RNPEPL1Q9HAU8 725 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 TMEM184CQ9NVA4 438 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 LRIT1Q9P2V4 623 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 CD300AQ9UGN4 299 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 FAM149AA5PLN7 773 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 OR5K4A6NMS3 321 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 RHPN2P1A8MT19 583 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ISM1B1AKI9 464 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ZW10O43264 779 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 OR1F1O43749 312 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 NUDT21O43809 227 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PCDH7O60245 1069 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PRMT3O60678 531 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 KRT36O76013 467 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 KLHL18O94889 574 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 CCNDBP1O95273 360 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ANXA4P09525 319 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PRPS1L1P21108 318 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PTX3P26022 381 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 CMPK1P30085 196 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 SERPINB1P30740 379 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 MSX2P35548 267 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ERFP50548 548 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PLCL1Q15111 1095 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 UGT8Q16880 541 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ZNF425Q6IV72 752 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 DHDDSQ86SQ9 333 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 SLC15A3Q8IY34 581 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ARL14Q8N4G2 192 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 FAM156AQ8NDB6 213 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 GTF2H4Q92759 462 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 GFM2Q969S9 779 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 DPH7Q9BTV6 452 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 TRIM8Q9BZR9 551 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 CMTM6Q9NX76 183 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 GMPR2Q9P2T1 348 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 NKX1-2Q9UD57 310 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 CLCA2Q9UQC9 943 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 HAT1O14929 419 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 AKAP10O43572 662 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 MT-CO3P00414 261 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 NPPAP01160 153 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 HOXB3P14651 431 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 BCL6P41182 706 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 MAZP56270 477 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 CLDN6P56747 220 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 MS4A2Q01362 244 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 KHDRBS2Q5VWX1 349 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 SLC9B2Q86UD5 537 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ENDOVQ8N8Q3 282 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 JADE3Q92613 823 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 TMEM125Q96AQ2 219 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 OR2A14Q96R47 310 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 OR52E6Q96RD3 313 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 ZNF717Q9BY31 904 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 SUCOQ9UBS9 1254 aaKnown RBP16.65■□□□□ 0.26
SRSF1-201ENST00000258962 KLHL20Q9Y2M5 609 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 RNF215Q9Y6U7 377 aa16.65■□□□□ 0.26
SRSF1-201ENST00000258962 RP1P56715 2156 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 ACOT8O14734 319 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 FKBP6O75344 327 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SEMA3DO95025 777 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 PSMG1O95456 288 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 B3GALT4O96024 378 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 PNLIPP16233 465 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 S100A3P33764 101 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 PLIN5Q00G26 463 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms