RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OC90Q02509 493 aaPredicted RBP17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 SLC5A8Q8N695 610 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 TRPV3Q8NET8 790 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 CREB3L4Q8TEY5 395 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 RELTQ969Z4 430 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 VPS39Q96JC1 886 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 TSPAN10Q9H1Z9 355 aaPredicted RBP17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 RHOJQ9H4E5 214 aa17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 MTO1Q9Y2Z2 717 aaKnown RBP17.84■□□□□ 0.45
TM6SF1-201ENST00000258909 A0A0G2JN53 185 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 CXorf49A8MYA2 514 aaPredicted RBP17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 NDC80O14777 642 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 SMIM10L1P0DMW3 83 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 CDKL1Q00532 357 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 FBXO48Q5FWF7 155 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 ZNF468Q5VIY5 522 aaPredicted RBP17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 ANKRD7Q92527 254 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 RHBDF1Q96CC6 855 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 SMIM10Q96HG1 83 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 MCMBPQ9BTE3 642 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 NECTIN3Q9NQS3 549 aa17.83■□□□□ 0.45
TM6SF1-201ENST00000258909 ABCA12Q86UK0 2595 aa17.83■□□□□ 0.44
TM6SF1-201ENST00000258909 URADA6NGE7 173 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 PSMD12O00232 456 aaPredicted RBP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC12A2P55011 1212 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 TAS2R50P59544 299 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 NIPAL1Q6NVV3 410 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 QSOX2Q6ZRP7 698 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 ADAMTSL2Q86TH1 951 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 ELP5Q8TE02 316 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 PYROXD1Q8WU10 500 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 CCT6BQ92526 530 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SAYSD1Q9NPB0 183 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 ARHGAP10A1A4S6 786 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 CCL21O00585 134 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 PHGDHO43175 533 aaKnown RBP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SERPINA6P08185 405 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 C1GALT1C1LP0DN25 315 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 RNH1P13489 461 aaKnown RBP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 CD46P15529 392 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 GNAZP19086 355 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 EEF1DP29692 281 aaKnown RBP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC6A12P48065 614 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 HNMTP50135 292 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 BTN3A2P78410 334 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SLBPQ14493 270 aaKnown RBP eCLIP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 SLCO4C1Q6ZQN7 724 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 GALNTL5Q7Z4T8 443 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 RPS19BP1Q86WX3 136 aaKnown RBP17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 CA13Q8N1Q1 262 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 ESAMQ96AP7 390 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 NSMCE4AQ9NXX6 385 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 LRFN1Q9P244 771 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 COPG2Q9UBF2 871 aa17.82■□□□□ 0.44
TM6SF1-201ENST00000258909 PRSS44E7EML9 344 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 TAPBPO15533 448 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 H2AFYO75367 372 aaKnown RBP17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 NEURL1O76050 574 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 TPP2P29144 1249 aaPredicted RBP17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 TGFBIQ15582 683 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 SP5Q6BEB4 398 aaPredicted RBP17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 SCMH1Q96GD3 660 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 CCDC120Q96HB5 630 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 TMEM79Q9BSE2 394 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 DERL2Q9GZP9 239 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 POPDC3Q9HBV1 291 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 PRDM9Q9NQV7 894 aa17.81■□□□□ 0.44
TM6SF1-201ENST00000258909 IGKV3D-11A0A0A0MRZ8 115 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 TCRBV16S1A1N1A0A5B0 115 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 SAGE2PA6NJ88 616 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 NPIPA5E9PKD4 350 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ZNHIT1O43257 154 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 WISP3O95389 354 aaPredicted RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 SP1P08047 785 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 CCDC166P0CW27 439 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 HNRNPH1P31943 449 aaKnown RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 GMPRP36959 345 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 CA7P43166 264 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 POU4F1Q01851 419 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ALDH6A1Q02252 535 aaKnown RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 RUNX2Q13950 521 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 MAPKAPK3Q16644 382 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ADNP2Q6IQ32 1131 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 TMIGD1Q6UXZ0 262 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 BBOF1Q8ND07 529 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 NFAM1Q8NET5 270 aaPredicted RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ITLN2Q8WWU7 325 aaPredicted RBP17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 FAR2Q96K12 515 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ERP44Q9BS26 406 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 WWOXQ9NZC7 414 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 RNF14Q9UBS8 474 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 NPIPA1Q9UND3 350 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 PCDHGB6Q9Y5F9 930 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 CSMD1Q96PZ7 3565 aa17.8■□□□□ 0.44
TM6SF1-201ENST00000258909 ERI3O43414 337 aaKnown RBP17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 RAD51CO43502 376 aa17.79■□□□□ 0.44
TM6SF1-201ENST00000258909 SLC19A2O60779 497 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms