RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
SLC52A1-201ENST00000254853 ITGB1BP2Q9UKP3 347 aa16.41■□□□□ 0.22
SLC52A1-201ENST00000254853 CAB39Q9Y376 341 aaPredicted RBP16.41■□□□□ 0.22
SLC52A1-201ENST00000254853 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 FADS2P1A8MWK0 482 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 PCDH17O14917 1159 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 AP2A2O94973 939 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 DNTTP04053 509 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 S100A5P33763 92 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 CTSCP53634 463 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 LIMK1P53667 647 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 IRF3Q14653 427 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ATAD3BQ5T9A4 648 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 GDPD4Q6W3E5 623 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 DEFB128Q7Z7B8 93 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 MYLIPQ8WY64 445 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 MRPS31Q92665 395 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 CIDECQ96AQ7 238 aaPredicted RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 TXNDC15Q96J42 360 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 TMEM121BQ9BXQ6 578 aaPredicted RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 EMILIN2Q9BXX0 1053 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 BHLHE41Q9C0J9 482 aaPredicted RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 IMPAD1Q9NX62 359 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ATP6V1HQ9UI12 483 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 MAPRE3Q9UPY8 281 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 RBMX2Q9Y388 322 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 A8MU76 341 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 SNPHO15079 494 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ADRA2AP08913 450 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ALOX12P18054 663 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 MC1RQ01726 317 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ZNF45Q02386 682 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 SP3Q02447 781 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 PRKCDQ05655 676 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 HEATR4Q86WZ0 1026 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 RAVER1Q8IY67 606 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 B3GNT7Q8NFL0 401 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 OR56A3Q8NH54 315 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 NEIL2Q969S2 332 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 GTPBP3Q969Y2 492 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 TMEM159Q96B96 161 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 RIOK2Q9BVS4 552 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 REEP4Q9H6H4 257 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 ATP11BQ9Y2G3 1177 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 IFT52Q9Y366 437 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 TSC22D4Q9Y3Q8 395 aa16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 CFAP20Q9Y6A4 193 aaKnown RBP16.4■□□□□ 0.22
SLC52A1-201ENST00000254853 OBSL1O75147 1896 aa16.39■□□□□ 0.22
SLC52A1-201ENST00000254853 PTX3P26022 381 aaPredicted RBP16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 PRIM2P49643 509 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 SLC7A9P82251 487 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 TEKQ02763 1124 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 BCL2A1Q16548 175 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 TMPRSS11BQ86T26 416 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 AKAP14Q86UN6 197 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 NLGN4XQ8N0W4 816 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 OR52N2Q8NGI0 321 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 GOT1L1Q8NHS2 421 aaPredicted RBP16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 ROGDIQ9GZN7 287 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 THSD1Q9NS62 852 aa16.39■□□□□ 0.21
SLC52A1-201ENST00000254853 LEFTY2O00292 366 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 SAP18O00422 153 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 NPC1O15118 1278 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 CATP04040 527 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 UGT2B15P54855 530 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 PCDH1Q08174 1060 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 DESI1Q6ICB0 168 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 SLCO4C1Q6ZQN7 724 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 KLHDC8AQ8IYD2 350 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 METTL4Q8N3J2 472 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 RASGEF1AQ8N9B8 481 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 OR5AK3PQ8NH89 298 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 OR5M11Q96RB7 305 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 FAM129BQ96TA1 746 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF556Q9HAH1 456 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 TRIM39Q9HCM9 518 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 ITM2CQ9NQX7 267 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 ACER3Q9NUN7 267 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 MAP4K5Q9Y4K4 846 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 PRAMEF33A0A0G2JMD5 474 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 HAT1O14929 419 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 GRM6O15303 877 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 PRAMEF10O60809 474 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 PTTG1O95997 202 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 CTSAP10619 480 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 VIPR1P32241 457 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 POLR2LP62875 67 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 EEF1A2Q05639 463 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF763Q0D2J5 394 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 GANABQ14697 944 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 EIF4HQ15056 248 aaKnown RBP16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 MPEG1Q2M385 716 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 MED27Q6P2C8 311 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 NLRP8Q86W28 1048 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 RNF130Q86XS8 419 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 CYP4Z2PQ8N1L4 340 aa16.38■□□□□ 0.21
SLC52A1-201ENST00000254853 LMNTD1Q8N9Z9 388 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms