RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TGFB1P01137 390 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 STATHP02808 62 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 NTRK1P04629 796 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 SERPIND1P05546 499 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 ZNF888P0CJ79 500 aaPredicted RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 SERPINB3P29508 390 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 MDH1P40925 334 aaKnown RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 TGM3Q08188 693 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 TBL3Q12788 808 aaKnown RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 DSG2Q14126 1118 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 FAM219BQ5XKK7 198 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 TRIM40Q6P9F5 258 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 C6orf15Q6UXA7 325 aaPredicted RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 MED25Q71SY5 747 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 TIPARPQ7Z3E1 657 aaKnown RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 ESX1Q8N693 406 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 TWIST2Q8WVJ9 160 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 CCT6BQ92526 530 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 RGMAQ96B86 450 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 F2RL3Q96RI0 385 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 CENPKQ9BS16 269 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 ANKHQ9HCJ1 492 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 LHX9Q9NQ69 397 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 PRDM7Q9NQW5 492 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 TXLNGQ9NUQ3 528 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 DHCR7Q9UBM7 475 aaKnown RBP13.39□□□□□ -0.27
VPS25-201ENST00000253794 VPS29Q9UBQ0 182 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 ADAM29Q9UKF5 820 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 AK5Q9Y6K8 562 aa13.39□□□□□ -0.27
VPS25-201ENST00000253794 IGLV3-12A0A075B6K2 115 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 A0A088AWK7 358 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 SLCO1B7G3V0H7 640 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 PLPP1O14494 284 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 ERI3O43414 337 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 RSL1D1O76021 490 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 BSGP35613 385 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 AVPR1BP47901 424 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 DCDP81605 110 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 NKAIN1Q4KMZ8 207 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 GALNT18Q6P9A2 607 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 Q6ZSR9 355 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 LRRC34Q8IZ02 419 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 ZCCHC7Q8N3Z6 543 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 AMER3Q8N944 861 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 PIWIL2Q8TC59 973 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 FKBP10Q96AY3 582 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 MTFMTQ96DP5 389 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 C17orf62Q9BQA9 187 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 NPLQ9BXD5 320 aaPredicted RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 DDX31Q9H8H2 851 aaKnown RBP13.38□□□□□ -0.27
VPS25-201ENST00000253794 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 VTI1BQ9UEU0 232 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 AHCTF1Q8WYP5 2266 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
VPS25-201ENST00000253794 A0A0A6YYC8 382 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 I3L1I5 382 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 SLC28A1O00337 649 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 TERTO14746 1132 aaKnown RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 PIP5K1BO14986 540 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 RAD1O60671 282 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 KLHL18O94889 574 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 ALBP02768 609 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 KLK3P07288 261 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 LIPCP11150 499 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 PIM1P11309 404 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 IL1RNP18510 177 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 HIST1H1TP22492 207 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 STAT5AP42229 794 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 MTTPP55157 894 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 RAB8AP61006 207 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 GUCY1A3Q02108 690 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 DEFB134Q4QY38 66 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 OR4C11Q6IEV9 310 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 ZNF793Q6ZN11 406 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 COX15Q7KZN9 410 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 CRLF3Q8IUI8 442 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 NLGN4XQ8N0W4 816 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 NLGN4YQ8NFZ3 816 aaPredicted RBP13.37□□□□□ -0.27
VPS25-201ENST00000253794 OR9A4Q8NGU2 314 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 CHTF18Q8WVB6 975 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 STON2Q8WXE9 905 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 FCRL1Q96LA6 429 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 SERINC2Q96SA4 455 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 HBEGFQ99075 208 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
VPS25-201ENST00000253794 TGIF2Q9GZN2 237 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms