RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 IMMP1LQ96LU5 166 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 CLMPQ9H6B4 373 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 ZNF358Q9NW07 568 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 IKBKGQ9Y6K9 419 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 CNTRLQ7Z7A1 2325 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 CCDC189A1A4V9 331 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 SYCE1LA8MT33 242 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 K7EPI3 171 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 CLEC3AO75596 197 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 WFS1O76024 890 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 SEC24DO94855 1032 aaPredicted RBP21.63■■□□□ 1.05
LSM4-201ENST00000252816 SERPINA7P05543 415 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 FHP07954 510 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 GSTM2P28161 218 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 STXBP1P61764 594 aaKnown RBP21.63■■□□□ 1.05
LSM4-201ENST00000252816 IRF8Q02556 426 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 E2F2Q14209 437 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 TBCCQ15814 346 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 NIPAL1Q6NVV3 410 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 CPEB2Q7Z5Q1 589 aaKnown RBP21.63■■□□□ 1.05
LSM4-201ENST00000252816 ANKRD37Q7Z713 158 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 ZADH2Q8N4Q0 377 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 CPT1CQ8TCG5 803 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 BRIX1Q8TDN6 353 aaKnown RBP21.63■■□□□ 1.05
LSM4-201ENST00000252816 TM9SF4Q92544 642 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 TSLPQ969D9 159 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 MS4A6EQ96DS6 147 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 SEC16BQ96JE7 1060 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 WDR77Q9BQA1 342 aaPredicted RBP21.63■■□□□ 1.05
LSM4-201ENST00000252816 EFCAB11Q9BUY7 163 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 SLAMF7Q9NQ25 335 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 OPTCQ9UBM4 332 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 ZNF180Q9UJW8 692 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 B3GNT3Q9Y2A9 372 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 FLNCQ14315 2725 aa21.63■■□□□ 1.05
LSM4-201ENST00000252816 A0A0G2JN53 185 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 KLK8O60259 260 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 ABHD2P08910 425 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 CASP2P42575 452 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 BTN3A2P78410 334 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 SETDB1Q15047 1291 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 PFKFB4Q16877 469 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 TECRLQ5HYJ1 363 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 Q6ZS92 163 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 PLPP5Q8NEB5 264 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 GAL3ST3Q96A11 431 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 TUBB6Q9BUF5 446 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 TXLNGYQ9BZA5 131 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 RHBGQ9H310 441 aa21.62■■□□□ 1.05
LSM4-201ENST00000252816 ANKDD1BA6NHY2 528 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 LRRC14BA6NHZ5 514 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 TRIM49D1C9J1S8 452 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 RIPK2O43353 540 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 ERI3O43414 337 aaKnown RBP21.61■■□□□ 1.05
LSM4-201ENST00000252816 B4GALT2O60909 372 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 KRT38O76015 456 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 ITGAMP11215 1152 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 GFAPP14136 432 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 GCAP28676 217 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 PCDH1Q08174 1060 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 ABRAXAS2Q15018 415 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 NSDHLQ15738 373 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 ADPRMQ3LIE5 342 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 KLC3Q6P597 504 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 ISLR2Q6UXK2 745 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 LINC00696Q6ZRV3 163 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 RIPOR1Q6ZS17 1223 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 TRMT10CQ7L0Y3 403 aaKnown RBP21.61■■□□□ 1.05
LSM4-201ENST00000252816 TAOK1Q7L7X3 1001 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 GSPT2Q8IYD1 628 aaKnown RBP21.61■■□□□ 1.05
LSM4-201ENST00000252816 SIRT6Q8N6T7 355 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 L2HGDHQ9H9P8 463 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 CLK4Q9HAZ1 481 aaKnown RBP21.61■■□□□ 1.05
LSM4-201ENST00000252816 PTGFRNQ9P2B2 879 aa21.61■■□□□ 1.05
LSM4-201ENST00000252816 C19orf25Q9UFG5 118 aaPredicted RBP21.61■■□□□ 1.05
LSM4-201ENST00000252816 EXOC1LA0A1B0GW35 172 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 MAGEB17A8MXT2 336 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 FAM227AF5H4B4 570 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 CNTFP26441 200 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 SOX11P35716 441 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 ALDH18A1P54886 795 aaKnown RBP21.6■■□□□ 1.05
LSM4-201ENST00000252816 MFAP5Q13361 173 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 LAPTM5Q13571 262 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 NAA30Q147X3 362 aaPredicted RBP21.6■■□□□ 1.05
LSM4-201ENST00000252816 INPP5JQ15735 1006 aaPredicted RBP21.6■■□□□ 1.05
LSM4-201ENST00000252816 CRB2Q5IJ48 1285 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 PAGE2BQ5JRK9 111 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 CUZD1Q86UP6 607 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 CA13Q8N1Q1 262 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 TEX9Q8N6V9 391 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 PPP4R1Q8TF05 950 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 QRFPRQ96P65 431 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 LMF1Q96S06 567 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 REXO4Q9GZR2 422 aaKnown RBP21.6■■□□□ 1.05
LSM4-201ENST00000252816 CPSF2Q9P2I0 782 aaKnown RBP21.6■■□□□ 1.05
LSM4-201ENST00000252816 SCN2AQ99250 2005 aa21.6■■□□□ 1.05
LSM4-201ENST00000252816 RNH1P13489 461 aaKnown RBP21.59■■□□□ 1.05
LSM4-201ENST00000252816 EPB42P16452 691 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 JAK1P23458 1154 aa21.59■■□□□ 1.05
LSM4-201ENST00000252816 PLA2G16P53816 162 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms