RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CDC7O00311 574 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 H2AFYO75367 372 aaKnown RBP19.75■□□□□ 0.75
NEDD8-201ENST00000250495 SP1P08047 785 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 SERPINA6P08185 405 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 SMIM10L1P0DMW3 83 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 RNH1P13489 461 aaKnown RBP19.75■□□□□ 0.75
NEDD8-201ENST00000250495 BTG2P78543 158 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 CREG2Q8IUH2 290 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 ANKRD53Q8N9V6 530 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 ARMC2Q8NEN0 867 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 SMIM10Q96HG1 83 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 GPR137Q96N19 417 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 HES7Q9BYE0 225 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 PRDM9Q9NQV7 894 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 NSMCE4AQ9NXX6 385 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 MOCS1Q9NZB8 636 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 PYCARDQ9ULZ3 195 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 OARD1Q9Y530 152 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 PSAT1Q9Y617 370 aa19.75■□□□□ 0.75
NEDD8-201ENST00000250495 CCDC188H7C350 402 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 NEURL1O76050 574 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 SEC31AO94979 1220 aaKnown RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 ESRRAP11474 423 aaPredicted RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 GNAZP19086 355 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 ST13P50502 369 aaKnown RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 TAS2R39P59534 338 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 HYAL2Q12891 473 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 ILF2Q12905 390 aaKnown RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 PDIA2Q13087 525 aaKnown RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 XKRXQ6PP77 449 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 FRA10AC1Q70Z53 315 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 GALNTL5Q7Z4T8 443 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 SRRM1Q8IYB3 904 aaKnown RBP19.74■□□□□ 0.75
NEDD8-201ENST00000250495 FBXO36Q8NEA4 188 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 MAGED4Q96JG8 741 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 KLHL31Q9H511 634 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 CHST11Q9NPF2 352 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 CTNNAL1Q9UBT7 734 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 SAR1BQ9Y6B6 198 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 PCNX1Q96RV3 2341 aa19.74■□□□□ 0.75
NEDD8-201ENST00000250495 TCRBV16S1A1N1A0A5B0 115 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 NPEPPSL1A6NEC2 478 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 SAGE2PA6NJ88 616 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 NPIPA5E9PKD4 350 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 WISP2O76076 250 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 TNFRSF8P28908 595 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 PAFAH1B1P43034 410 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 CYB561P49447 251 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 STXBP1P61764 594 aaKnown RBP19.73■□□□□ 0.75
NEDD8-201ENST00000250495 MAPKAPK3Q16644 382 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 BNC2Q6ZN30 1099 aaPredicted RBP19.73■□□□□ 0.75
NEDD8-201ENST00000250495 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.73■□□□□ 0.75
NEDD8-201ENST00000250495 ADAMTSL2Q86TH1 951 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 SPPL2CQ8IUH8 684 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 KIF2BQ8N4N8 673 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 TTLQ8NG68 377 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 CREB3L4Q8TEY5 395 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 FAR2Q96K12 515 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 TRIM51Q9BSJ1 452 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 CAPS2Q9BXY5 557 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 TRIM31Q9BZY9 425 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 RHBGQ9H310 441 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 NPIPA1Q9UND3 350 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 ZNF835Q9Y2P0 537 aa19.73■□□□□ 0.75
NEDD8-201ENST00000250495 GTF3C1Q12789 2109 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 CTAGE15A4D2H0 777 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 EFCAB8A8MWE9 144 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 C1GALT1C1LP0DN25 315 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 MAOAP21397 527 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 TPP2P29144 1249 aaPredicted RBP19.72■□□□□ 0.75
NEDD8-201ENST00000250495 SMSP52788 366 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 SLC12A2P55011 1212 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 MLF1P58340 268 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 GNG11P61952 73 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 ZNF460Q14592 562 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 C3AR1Q16581 482 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 TOR1AIP1Q5JTV8 583 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 CTAGE6Q86UF2 777 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 CA13Q8N1Q1 262 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 FRMD6Q96NE9 622 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 DEFB126Q9BYW3 111 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 UNKQ9C0B0 810 aaKnown RBP19.72■□□□□ 0.75
NEDD8-201ENST00000250495 RHOJQ9H4E5 214 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 TRIM45Q9H8W5 580 aaPredicted RBP19.72■□□□□ 0.75
NEDD8-201ENST00000250495 POPDC3Q9HBV1 291 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 GPAMQ9HCL2 828 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 MMACHCQ9Y4U1 282 aa19.72■□□□□ 0.75
NEDD8-201ENST00000250495 IGKV3D-11A0A0A0MRZ8 115 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 E7ESA3 106 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 FCHO1O14526 889 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 ASNA1O43681 348 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 SLC25A12O75746 678 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 WDR47O94967 919 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 PRF1P14222 555 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 GSTM2P28161 218 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 HTR1EP28566 365 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 BTN3A2P78410 334 aa19.71■□□□□ 0.75
NEDD8-201ENST00000250495 TSNQ15631 228 aaKnown RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 ZNF630Q2M218 657 aaPredicted RBP19.71■□□□□ 0.75
NEDD8-201ENST00000250495 ZNF468Q5VIY5 522 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms