RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 FAM83CQ9BQN1 747 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 CORO1BQ9BR76 489 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 FKBP14Q9NWM8 211 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 GPR83Q9NYM4 423 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 UPK1BO75841 260 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 GBAP04062 536 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 SRPRAP08240 638 aaKnown RBP17.97■□□□□ 0.47
CPSF3-201ENST00000238112 ZNF8P17098 575 aaPredicted RBP17.97■□□□□ 0.47
CPSF3-201ENST00000238112 SERPINB1P30740 379 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 ELOAQ14241 798 aaKnown RBP17.97■□□□□ 0.47
CPSF3-201ENST00000238112 FBXO43Q4G163 708 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 ARSIQ5FYB1 569 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 COLEC12Q5KU26 742 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 TRIM40Q6P9F5 258 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 TUBA3EQ6PEY2 450 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 OTOP2Q7RTS6 562 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 COMMD6Q7Z4G1 85 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 OXR1Q8N573 874 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 DENND6BQ8NEG7 585 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 HPS1Q92902 700 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 PPCDCQ96CD2 204 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 HHIPL1Q96JK4 782 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 COL21A1Q96P44 957 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 GPBP1L1Q9HC44 474 aaPredicted RBP17.97■□□□□ 0.47
CPSF3-201ENST00000238112 THSD1Q9NS62 852 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 DUSP12Q9UNI6 340 aa17.97■□□□□ 0.47
CPSF3-201ENST00000238112 LOC100506127A0A0U1RQW1 187 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 ISPDA4D126 451 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 SAGE2PA6NJ88 616 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 TAF4O00268 1085 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 NPC1O15118 1278 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 STSP08842 583 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 TMEM115Q12893 351 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-201ENST00000238112 ARMC8Q8IUR7 673 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 LACC1Q8IV20 430 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 KBTBD8Q8NFY9 601 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 SCHIP1Q9P0W5 487 aaPredicted RBP17.96■□□□□ 0.47
CPSF3-201ENST00000238112 ACSL6Q9UKU0 697 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 WDR37Q9Y2I8 494 aa17.96■□□□□ 0.47
CPSF3-201ENST00000238112 AGAP5A6NIR3 686 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 IFNA14P01570 189 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TIMP2P16035 220 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 PDHA2P29803 388 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 CHI3L1P36222 383 aaPredicted RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 RPL3P39023 403 aaKnown RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TBPL1P62380 186 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TEKQ02763 1124 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 SLBPQ14493 270 aaKnown RBP eCLIP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 CNKSR3Q6P9H4 555 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TMEM220Q6QAJ8 160 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 GEMIN6Q8WXD5 167 aaKnown RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 CIDECQ96AQ7 238 aaPredicted RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 EHD1Q9H4M9 534 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 PRDM8Q9NQV8 689 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ASAH2Q9NR71 780 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF226Q9NYT6 803 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 NFKBIL1Q9UBC1 381 aaPredicted RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 DYRK1BQ9Y463 629 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 MAP4K5Q9Y4K4 846 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 H3BM21 787 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 SAP18O00422 153 aaKnown RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 C8AP07357 584 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ADORA3P0DMS8 318 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 CDK6Q00534 326 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ADIPOR2Q86V24 386 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 OR9Q2Q8NGE9 314 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF480Q8WV37 535 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF689Q96CS4 500 aaPredicted RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 ERLEC1Q96DZ1 483 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 VPS35Q96QK1 796 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TMEM38AQ9H6F2 299 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 SP140LQ9H930 580 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 FAM32AQ9Y421 112 aaKnown RBP17.95■□□□□ 0.46
CPSF3-201ENST00000238112 A3GALT2U3KPV4 340 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 COL4A6Q14031 1691 aa17.95■□□□□ 0.46
CPSF3-201ENST00000238112 TRIM43BA6NCK2 446 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 A8MVJ9 347 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 FOXE1O00358 373 aaPredicted RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 FURINP09958 794 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 TYRP14679 529 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 S100A5P33763 92 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 MC1RQ01726 317 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 C2orf80Q0P641 193 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ST3GAL4Q11206 333 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 E2F2Q14209 437 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ZNF181Q2M3W8 571 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 POM121L1PQ3SYA9 428 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 CYP27C1Q4G0S4 372 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 C10orf62Q5T681 223 aaPredicted RBP17.94■□□□□ 0.46
CPSF3-201ENST00000238112 LYSMD2Q8IV50 215 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 OR5AK3PQ8NH89 298 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 AP2M1Q96CW1 435 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 ABHD8Q96I13 439 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 PIP5K1AQ99755 562 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 EFCAB11Q9BUY7 163 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 KLHL25Q9H0H3 589 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 CPNE5Q9HCH3 593 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 J3KTA2 159 aa17.94■□□□□ 0.46
CPSF3-201ENST00000238112 TLL1O43897 1013 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms