RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SLC9B2Q86UD5 537 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 LRRTM4Q86VH4 590 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 TTC29Q8NA56 475 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 ZNF740Q8NDX6 193 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 BPIFB6Q8NFQ5 453 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 FKBP10Q96AY3 582 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 TPD52L3Q96J77 140 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 ZNF347Q96SE7 839 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 APOL4Q9BPW4 351 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 SLC35A5Q9BS91 424 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 DCUN1D5Q9BTE7 237 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 RAD21L1Q9H4I0 556 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 SFXN1Q9H9B4 322 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 PELI2Q9HAT8 420 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 PRM3Q9NNZ6 103 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 PAK1IP1Q9NWT1 392 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-201ENST00000237186 AHSPQ9NZD4 102 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 SLC23A2Q9UGH3 650 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 TPRKBQ9Y3C4 175 aa15.49■□□□□ 0.07
UBE3D-201ENST00000237186 KLHL33A6NCF5 533 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 TBX6O95947 436 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 GBAP04062 536 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 RPN2P04844 631 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 KLK1P06870 262 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 FCARP24071 287 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CXCR2P25025 360 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CRATP43155 626 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 MEF2AQ02078 507 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 NFATC3Q12968 1075 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 SIM2Q14190 667 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 DUSP6Q16828 381 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 GCNT6Q5T4J0 391 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 ZNF852Q6ZMS4 543 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 ARHGAP22Q7Z5H3 698 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 HEATR4Q86WZ0 1026 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 NATD1Q8N6N6 113 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 ABHD11Q8NFV4 315 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 OR5K2Q8NHB8 316 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 THAP11Q96EK4 314 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 IL17FQ96PD4 163 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PITHD1Q9GZP4 211 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PCBD2Q9H0N5 130 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 RIBC2Q9H4K1 309 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PLGRKTQ9HBL7 147 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 WASH6PQ9NQA3 447 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 NDUFAF4Q9P032 175 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 SPASTQ9UBP0 616 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PSME2Q9UL46 239 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 GMPPBQ9Y5P6 360 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CHD7Q9P2D1 2997 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 SAP18O00422 153 aaKnown RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 KRT75O95678 551 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 EPHX1P07099 455 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 ETFAP13804 333 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 ACVR2AP27037 513 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 TEAD1P28347 426 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 TPP2P29144 1249 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 EIF2DP41214 584 aaKnown RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 STT3AP46977 705 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PXNP49023 591 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 SLC35A2P78381 396 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CDK3Q00526 305 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CRB2Q5IJ48 1285 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 COX20Q5RI15 118 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 IER5LQ5T953 404 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 DEPDC1Q5TB30 811 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 B3GNT8Q7Z7M8 397 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 FAM124AQ86V42 546 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 C17orf64Q86WR6 236 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBE3D-201ENST00000237186 CNIH3Q8TBE1 160 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 MENTQ9BUN1 341 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 EPS8L2Q9H6S3 715 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 NT5DC2Q9H857 520 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 THSD1Q9NS62 852 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 KRT84Q9NSB2 600 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 RAPGEFL1Q9UHV5 662 aa15.48■□□□□ 0.07
UBE3D-201ENST00000237186 A0A1W2PRB8 838 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 GPR89AB7ZAQ6 455 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 ADAMDEC1O15204 470 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 GPR89BP0CG08 455 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 SERPINB1P30740 379 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 GJA4P35212 333 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 DRD3P35462 400 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 ERVK-21P61565 698 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 SCARB2Q14108 478 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 PRSS53Q2L4Q9 553 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 ZNF630Q2M218 657 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-201ENST00000237186 WSCD2Q2TBF2 565 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 SLC30A8Q8IWU4 369 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 ATG16L2Q8NAA4 619 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 TBC1D15Q8TC07 691 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 CIDECQ96AQ7 238 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-201ENST00000237186 BCL7BQ9BQE9 202 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 ZNF717Q9BY31 904 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-201ENST00000237186 GABARAPL3Q9BY60 117 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 SPATA7Q9P0W8 599 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 PRKAB1Q9Y478 270 aa15.47■□□□□ 0.07
UBE3D-201ENST00000237186 LAMA3Q16787 3333 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms