RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 AUTS2Q8WXX7 1259 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 ZNF486Q96H40 463 aaPredicted RBP17.77■□□□□ 0.43
CACTIN-201ENST00000221899 EXOSC4Q9NPD3 245 aaKnown RBP17.77■□□□□ 0.43
CACTIN-201ENST00000221899 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 CORO2BQ9UQ03 480 aa17.77■□□□□ 0.43
CACTIN-201ENST00000221899 ZW10O43264 779 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CCNKO75909 580 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 PTGES3Q15185 160 aaKnown RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 IER5LQ5T953 404 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 FAM180BQ6P0A1 224 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 DPY19L3Q6ZPD9 716 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 DEPDC4Q8N2C3 294 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 OR7G3Q8NG95 312 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 WDR36Q8NI36 951 aaKnown RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CLP1Q92989 425 aaKnown RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 MGLLQ99685 303 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 C19orf43Q9BQ61 176 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 TMEM175Q9BSA9 504 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 NEK6Q9HC98 313 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 FBXL12Q9NXK8 326 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 A3GALT2U3KPV4 340 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 A0A1W2PQ45 241 aaPredicted RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 A0A1W2PQY0 241 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CKMP06732 381 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 SOX6P35712 828 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 ANXA8L1Q5VT79 327 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 OR8H2Q8N162 312 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CHST14Q8NCH0 376 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 DENND6BQ8NEG7 585 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 CEP19Q96LK0 163 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 RAD9AQ99638 391 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 SDHCQ99643 169 aaPredicted RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 SPATA9Q9BWV2 254 aa17.76■□□□□ 0.43
CACTIN-201ENST00000221899 STOX2Q9P2F5 926 aaPredicted RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
CACTIN-201ENST00000221899 PRAMEF33A0A0G2JMD5 474 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 SLC16A5O15375 505 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 PRAMEF10O60809 474 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 ABLIM3O94929 683 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 PPIBP23284 216 aaKnown RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 ASMTP46597 345 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 PTPN5P54829 565 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 GCNT6Q5T4J0 391 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 GRHL2Q6ISB3 625 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 CMTM8Q8IZV2 173 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 TRMT2BQ96GJ1 504 aaKnown RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 IL4I1Q96RQ9 567 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 MRPL9Q9BYD2 267 aaKnown RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 RNF186Q9NXI6 227 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 BACE2Q9Y5Z0 518 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 LOC110117498-PIK3R3F6TDL0 507 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 H3BM21 787 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 AGRPO00253 132 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 RGS5O15539 181 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 SLC16A8O95907 504 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 PIK3CBP42338 1070 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 PXNP49023 591 aaPredicted RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 DEFA1P59665 94 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 DEFA3P59666 94 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 IRF3Q14653 427 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 C22orf39Q6P5X5 142 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 TMPRSS11BQ86T26 416 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 RNF130Q86XS8 419 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 AQP11Q8NBQ7 271 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 IL17RDQ8NFM7 739 aa17.75■□□□□ 0.43
CACTIN-201ENST00000221899 SMG9Q9H0W8 520 aaKnown RBP17.75■□□□□ 0.43
CACTIN-201ENST00000221899 LINC00854A0A1B0GVQ3 168 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 ARHGAP33O14559 1287 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 SGTAO43765 313 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 APOA1P02647 267 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 PBLDP30039 288 aaPredicted RBP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 TIA1P31483 386 aaKnown RBP eCLIP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 ASZ1Q8WWH4 475 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 COQ8BQ96D53 544 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 ECHDC3Q96DC8 303 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 CNPPD1Q9BV87 410 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 ACER3Q9NUN7 267 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 RAB23Q9ULC3 237 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 H0YIV9 168 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 AP3D1O14617 1153 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 UGDHO60701 494 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 TNFRSF21O75509 655 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 ZNF8P17098 575 aaPredicted RBP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 GJA1P17302 382 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 CNR2P34972 360 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 SOAT1P35610 550 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 FEN1P39748 380 aaKnown RBP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 LIMK1P53667 647 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 C21orf58P58505 322 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 LEXMQ3ZCV2 418 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 BCL7AQ4VC05 210 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 SYTL3Q4VX76 610 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 Q6ZVL8 140 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 Q6ZVU0 165 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 PTCHD4Q6ZW05 846 aa17.74■□□□□ 0.43
CACTIN-201ENST00000221899 RAVER1Q8IY67 606 aaKnown RBP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 VANGL1Q8TAA9 524 aaPredicted RBP17.74■□□□□ 0.43
CACTIN-201ENST00000221899 CHTF18Q8WVB6 975 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms