RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PRPH2P23942 346 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 FASP25445 335 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 EEFSECP57772 596 aaKnown RBP21.07■□□□□ 0.96
HOXC8-201ENST00000040584 REEP5Q00765 189 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 EMX2Q04743 252 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 CSTF3Q12996 717 aaKnown RBP21.07■□□□□ 0.96
HOXC8-201ENST00000040584 RCAN2Q14206 197 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 NRF1Q16656 503 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 SMU1Q2TAY7 513 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 ZNF438Q7Z4V0 828 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 PLD3Q8IV08 490 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 SLC35F3Q8IY50 421 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 ARL10Q8N8L6 244 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 C9orf16Q9BUW7 83 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 C1orf50Q9BV19 199 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 ANKRD60Q9BZ19 345 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 GMEB2Q9UKD1 530 aa21.07■□□□□ 0.96
HOXC8-201ENST00000040584 HEATR5BQ9P2D3 2071 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 EME2A4GXA9 379 aaPredicted RBP21.06■□□□□ 0.96
HOXC8-201ENST00000040584 C2orf74A8MZ97 194 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 SH3BGRLO75368 114 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 H6PDO95479 791 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 CXCR2P25025 360 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 MPLP40238 635 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 MTX3Q5HYI7 312 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 TBCELQ5QJ74 424 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 KRT80Q6KB66 452 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 B3GNT6Q6ZMB0 384 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 OOSP2Q86WS3 158 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 PTRH1Q86Y79 214 aaKnown RBP21.06■□□□□ 0.96
HOXC8-201ENST00000040584 UBE2E3Q969T4 207 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 DTNBP1Q96EV8 351 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 UCK1Q9HA47 277 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 BRF2Q9HAW0 419 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 LRTM1Q9HBL6 345 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 TMEM184CQ9NVA4 438 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 C1orf109Q9NX04 203 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 CMTM6Q9NX76 183 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 TSC22D4Q9Y3Q8 395 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 RNF215Q9Y6U7 377 aa21.06■□□□□ 0.96
HOXC8-201ENST00000040584 OR5K3A6NET4 321 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 CCDC154A6NI56 674 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 DFNA5O60443 496 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 UBXN7O94888 489 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 EPN2O95208 641 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 HSD3B1P14060 373 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 HSD3B2P26439 372 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 PPP1CAP62136 330 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 TUBA4AP68366 448 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 NFYCQ13952 458 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 KIAA0040Q15053 153 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 HMBOX1Q6NT76 420 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ANKRD53Q8N9V6 530 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 LOXL4Q96JB6 756 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 PPM1MQ96MI6 270 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 GTPBP2Q9BX10 602 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 NLGN3Q9NZ94 848 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 LRIT1Q9P2V4 623 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 MYRFQ9Y2G1 1151 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ENTPD2Q9Y5L3 495 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ZNF318Q5VUA4 2279 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 GOLGA4Q13439 2230 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ARID1BQ8NFD5 2236 aaPredicted RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 FAM234BA2RU67 622 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 RHPN2P1A8MT19 583 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 FXYD1O00168 92 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 LCMT2O60294 686 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 SEC22BO75396 215 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ETHE1O95571 254 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 AMD1P17707 334 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ATP6V1B2P21281 511 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 NUBP1P53384 320 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 RPS13P62277 151 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 C11orf91Q3C1V1 193 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 NADK2Q4G0N4 442 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ZC3H14Q6PJT7 736 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 RBM44Q6ZP01 1051 aaKnown RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 VN1R5Q7Z5H4 357 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 AMIGO2Q86SJ2 522 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 ZFAND4Q86XD8 727 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 PROSER1Q86XN7 944 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 TSPAN14Q8NG11 270 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 CENPNQ96H22 339 aaPredicted RBP21.05■□□□□ 0.96
HOXC8-201ENST00000040584 SLC39A3Q9BRY0 314 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 RAB23Q9ULC3 237 aa21.05■□□□□ 0.96
HOXC8-201ENST00000040584 PCDH15Q96QU1 1955 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 LILRA5A6NI73 299 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 FOXE1O00358 373 aaPredicted RBP21.04■□□□□ 0.96
HOXC8-201ENST00000040584 HAT1O14929 419 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 OR1F1O43749 312 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 TIPRLO75663 272 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 SYPP08247 313 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 HOXB3P14651 431 aaPredicted RBP21.04■□□□□ 0.96
HOXC8-201ENST00000040584 POLR2JP52435 117 aaKnown RBP21.04■□□□□ 0.96
HOXC8-201ENST00000040584 NME5P56597 212 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 RPL38P63173 70 aaKnown RBP21.04■□□□□ 0.96
HOXC8-201ENST00000040584 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.04■□□□□ 0.96
HOXC8-201ENST00000040584 AP1ARQ63HQ0 302 aa21.04■□□□□ 0.96
HOXC8-201ENST00000040584 TCEAL6Q6IPX3 200 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms