RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SULT1B1O43704 296 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TBL1XO60907 577 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 JRKO75564 520 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CSF1P09603 554 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CD44P16070 742 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RRAS2P62070 204 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 DUOXA1Q1HG43 343 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 AARDQ4LEZ3 155 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TRIM74Q86UV6 250 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TRIM73Q86UV7 250 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SERINC5Q86VE9 423 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CARM1Q86X55 608 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 BEST4Q8NFU0 473 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 MFSD8Q8NHS3 518 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ISOC1Q96CN7 298 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 MSI2Q96DH6 328 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 HSD17B14Q9BPX1 270 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GRHPRQ9UBQ7 328 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 A0A075B6Q4 140 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 EDDM13A0A1B0GTR0 161 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 C20orf202A1L168 122 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 E9PAM4 449 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FFAR3O14843 346 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PIP5K1BO14986 540 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GPR42O15529 346 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SOX11P35716 441 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ERFP50548 548 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PRKCDQ05655 676 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 IL23RQ5VWK5 629 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 KCNIP4Q6PIL6 250 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TMEM205Q6UW68 189 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ISLR2Q6UXK2 745 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PIGZQ86VD9 579 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 DCUN1D3Q8IWE4 304 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ENDOVQ8N8Q3 282 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 XAGE5Q8WWM1 108 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CCM2LQ9NUG4 571 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TMEM100Q9NV29 134 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PRSS51A0A1B0GVH4 220 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 EBLN1P0CF75 366 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TYRP14679 529 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PGAM2P15259 253 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CRYZQ08257 329 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PUM1Q14671 1186 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CD300LGQ6UXG3 332 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF101Q8IZC7 436 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RGL4Q8IZJ4 473 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 OR52E4Q8NGH9 312 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 OR8J1Q8NGP2 316 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GFM1Q96RP9 751 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SLC2A4RGQ9NR83 387 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 KLK14Q9P0G3 267 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 STXBP5LQ9Y2K9 1186 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FAAHO00519 579 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TAGLN2P37802 199 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FRKP42685 505 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ASPAP45381 313 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RFX5P48382 616 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PAN3Q58A45 887 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SLC35F1Q5T1Q4 408 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FAM162BQ5T6X4 162 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CYP4X1Q8N118 509 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 GPR156Q8NFN8 814 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PPP1R35Q8TAP8 253 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF419Q96HQ0 510 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 DGAT2Q96PD7 388 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FCRL5Q96RD9 977 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TSNAXQ99598 290 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SLC17A6Q9P2U8 582 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 DOCK4Q8N1I0 1966 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PRR5-ARHGAP8B1AHC4 643 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ATP6V1G2-DDX39BF2Z307 99 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RASAL1O95294 804 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CD6P30203 668 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ARHGAP8P85298 464 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FAM214AQ32MH5 1076 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TOR1AIP1Q5JTV8 583 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 B3GLCTQ6Y288 498 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PLD5Q8N7P1 536 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ASCC1Q8N9N2 400 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 FGGYQ96C11 551 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF382Q96SR6 550 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 BRINP2Q9C0B6 783 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 MAP10Q9P2G4 905 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 RAI2Q9Y5P3 530 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 H7C1Q1 480 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CELF2O95319 508 aaKnown RBP5.89□□□□□ -1.47
VPS13D-201ENST00000011700 CHRNB2P17787 502 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 LHCGRP22888 699 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 USP49Q70CQ1 688 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 NOXA1Q86UR1 476 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ACBD4Q8NC06 268 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 TAAR1Q96RJ0 339 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ULBP1Q9BZM6 244 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 ARMC1Q9NVT9 282 aa5.89□□□□□ -1.47
VPS13D-201ENST00000011700 SRRDQ9UH36 339 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms