RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Sf3b1Q99NB9 1304 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Zscan4dA7KBS4 506 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Vmn2r79E9Q067 851 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Vmn2r111K7N674 857 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 PtgisO35074 501 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Kcns2O35174 477 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 JchainP01592 159 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 VimP20152 466 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Akr1b1P45376 316 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 AdssP46664 456 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ndufs6P52503 116 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Mrps6P58064 125 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 SnrpfP62307 86 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Smyd1P97443 490 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ascl1Q02067 231 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Plk1Q07832 603 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ptcd3Q14C51 685 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tmem109Q3UBX0 243 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Dio1Q61153 257 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Fkbp3Q62446 224 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Gpr156Q6PCP7 798 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Txndc16Q7TN22 820 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 GnsQ8BFR4 544 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Glt28d2Q8BML3 165 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Vps9d1Q8C190 649 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Leg1Q8C6C9 337 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Txnl1Q8CDN6 289 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tmem30aQ8VEK0 364 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Olfr354Q8VGJ8 317 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Olfr345Q8VGK4 311 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Setd3Q91WC0 594 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Pot1Q91WC1 640 aaKnown RBP6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 NlnQ91YP2 704 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Sike1Q9CPR7 207 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ska2Q9CR46 120 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Atp13a2Q9CTG6 1169 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Psg23Q9D2U0 471 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 2310057N15RikQ9D6T8 200 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 MajinQ9D992 256 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Cacng4Q9JJV4 327 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Gpr34Q9R1K6 375 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 CpqQ9WVJ3 470 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Pex11aQ9Z211 246 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Zfp236S4R299 1847 aa6.57□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Gm3285A0A1W2P7U0 201 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Vwa5b1A9Z1V5 1215 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Zfp212G3X8R7 492 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Cyth3O08967 399 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Prl6a1O35257 230 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Itm2bO89051 266 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ren1P06281 402 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 WarsP32921 481 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Rfc1P35601 1131 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tbxas1P36423 533 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Nr2f2P43135 414 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Nr2c2P49117 596 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Anks1aP59672 1150 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Dcst1Q059Y8 732 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Trim72Q1XH17 477 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Acot10Q32MW3 439 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Trim38Q5SZ99 471 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Foxf1Q61080 378 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Znf235Q61116 645 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 HlxQ61670 476 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Sema3bQ62177 748 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Birc2Q62210 612 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ankrd6Q69ZU8 712 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Duxbl2Q7TNE6 350 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Olfr58Q7TRF6 309 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 RimklbQ80WS1 387 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Znf365Q8BG89 408 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 R3hcc1lQ8BJM3 775 aaKnown RBP6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Ccdc169Q8BXX9 214 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Lamtor4Q8CF66 99 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Adam4Q8CGQ2 763 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tada2aQ8CHV6 443 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Smtnl2Q8CI12 456 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Frat2Q8K025 231 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Uroc1Q8VC12 676 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Reep2Q8VCD6 254 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Swsap1Q8VCI7 278 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Olfr283Q8VGU2 309 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Cacng6Q8VHW3 260 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Trim60Q8VI40 466 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Asb7Q91ZU0 318 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tmem86aQ9D8N3 241 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tbc1d21Q9D9D3 336 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Xab2Q9DCD2 855 aaKnown RBP6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tacc2Q9JJG0 1149 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 RhagQ9QUT0 438 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tomm40Q9QYA2 361 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Fut8Q9WTS2 575 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Mettl1Q9Z120 268 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Adamts20P59511 1906 aa6.56□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Bdp1Q571C7 2467 aa6.55□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Igkv4-74A0A0B4J1I3 119 aa6.55□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Cyp2j7A0A140T8U1 504 aa6.55□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Tlx3O55144 291 aa6.55□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Psmc3O88685 442 aa6.55□□□□□ -1.36
Ccdc54-201ENSMUST00000062439 Krt1P04104 637 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms