RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 C1GALT1C1LP0DN25 315 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 GDF5P43026 501 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 RAB10P61026 200 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 RHAGQ02094 409 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 ABRAXAS2Q15018 415 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 NSDHLQ15738 373 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 ZKSCAN8Q15776 578 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-230ENST00000640482 KBTBD12Q3ZCT8 623 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 CDKL4Q5MAI5 379 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 ABHD17BQ5VST6 288 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 ZDHHC24Q6UX98 284 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 SPATA6LQ8N4H0 392 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 TTLQ8NG68 377 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 OR1N1Q8NGS0 311 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 PSMG3-AS1Q96PY0 264 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 LANCL2Q9NS86 450 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 PLA2G3Q9NZ20 509 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 WWOXQ9NZC7 414 aa23.76■■□□□ 1.39
VEGFA-230ENST00000640482 COL12A1Q99715 3063 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 OR2W5A6NFC9 320 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 MAGEB17A8MXT2 336 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 CHST10O43529 356 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 C1QAP02745 245 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 SERPINA6P08185 405 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 GP1BBP13224 206 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 CD1DP15813 335 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 TNFSF10P50591 281 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 ACTN3Q08043 901 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-230ENST00000640482 NAB1Q13506 487 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 EXT1Q16394 746 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 C18orf21Q32NC0 220 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-230ENST00000640482 FAM180AQ6UWF9 173 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 PPM1NQ8N819 430 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 GRHL3Q8TE85 626 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 SSC4DQ8WTU2 575 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 RNF32Q9H0A6 362 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.75■■□□□ 1.393e-8■■□□□ 12.3
VEGFA-230ENST00000640482 GPRC5BQ9NZH0 403 aa23.75■■□□□ 1.39
VEGFA-230ENST00000640482 SEMA7AO75326 666 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 GSTM2P28161 218 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 HNF4AP41235 474 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 OLR1P78380 273 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 TRADDQ15628 312 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 SULT1C3Q6IMI6 304 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 C8orf74Q6P047 294 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 SLCO4C1Q6ZQN7 724 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 KRT78Q8N1N4 520 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 ST6GALNAC3Q8NDV1 305 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 FBF1Q8TES7 1133 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 CREB3L4Q8TEY5 395 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 UBXN10Q96LJ8 280 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 LPAR4Q99677 370 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 DNAJC11Q9NVH1 559 aa23.74■■□□□ 1.39
VEGFA-230ENST00000640482 SCN3AQ9NY46 2000 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 CTAGE15A4D2H0 777 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 B3GALT4O96024 378 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 S100BP04271 92 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-230ENST00000640482 GGT5P36269 586 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 RAB8AP61006 207 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 STXBP1P61764 594 aaKnown RBP23.73■■□□□ 1.39
VEGFA-230ENST00000640482 ZNF33BQ06732 778 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 HYAL2Q12891 473 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 SLBPQ14493 270 aaKnown RBP eCLIP23.73■■□□□ 1.39
VEGFA-230ENST00000640482 SLMAPQ14BN4 828 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 OR4D1Q15615 310 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 INAQ16352 499 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 SFT2D3Q587I9 215 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 TOR1AIP1Q5JTV8 583 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 PAPD4Q6PIY7 484 aaKnown RBP23.73■■□□□ 1.39
VEGFA-230ENST00000640482 TMIGD1Q6UXZ0 262 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 RAPH1Q70E73 1250 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 CTAGE6Q86UF2 777 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 M1APQ8TC57 530 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 FAR1Q8WVX9 515 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 KIAA1191Q96A73 305 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 TMEM79Q9BSE2 394 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 PITHD1Q9GZP4 211 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-230ENST00000640482 STMN3Q9NZ72 180 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 CD274Q9NZQ7 290 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 RNF112Q9ULX5 631 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 HECTD1Q9ULT8 2610 aa23.73■■□□□ 1.39
VEGFA-230ENST00000640482 A8MUI8 341 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 PSMD12O00232 456 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-230ENST00000640482 CLGNO14967 610 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 TAPBPO15533 448 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 WDPCPO95876 746 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SMIM10L1P0DMW3 83 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 MYBL2P10244 700 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 OR4D2P58180 307 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SLC7A5Q01650 507 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■■■■ 40.2
VEGFA-230ENST00000640482 BCORP1Q8N888 145 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 PDPRQ8NCN5 879 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SUN3Q8TAQ9 357 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 TSLPQ969D9 159 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SMIM10Q96HG1 83 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 SEC16BQ96JE7 1060 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 ZNF354BQ96LW1 612 aa23.72■■□□□ 1.39
VEGFA-230ENST00000640482 MAGEB10Q96LZ2 347 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-230ENST00000640482 KLHL31Q9H511 634 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms