RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 REXO4Q9GZR2 422 aaKnown RBP7.41□□□□□ -1.22
NR1I3-235ENST00000628566 RHBGQ9H310 441 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 AKIRIN1Q9H9L7 192 aaPredicted RBP7.41□□□□□ -1.22
NR1I3-235ENST00000628566 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 NMRK1Q9NWW6 199 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 TMEM216Q9P0N5 145 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 SNX6Q9UNH7 406 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 MRPS33Q9Y291 106 aaKnown RBP7.41□□□□□ -1.22
NR1I3-235ENST00000628566 NAALAD2Q9Y3Q0 740 aa7.41□□□□□ -1.22
NR1I3-235ENST00000628566 MRPS18BQ9Y676 258 aaKnown RBP7.41□□□□□ -1.22
NR1I3-235ENST00000628566 IGLV3-12A0A075B6K2 115 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 A0A1W2PPM1 405 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 VSTM2BA6NLU5 285 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 A8MT66 165 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 H0YIV9 168 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 P2RX6O15547 441 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ERI3O43414 337 aaKnown RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 FOXS1O43638 330 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 B3GALT2O43825 422 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 CRCPO75575 148 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 KLF7O75840 302 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 WFS1O76024 890 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 SIX3O95343 332 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 CAPN1P07384 714 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ZNF888P0CJ79 500 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 IMPDH1P20839 514 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 GMPRP36959 345 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 PIK3CBP42338 1070 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 TSFMP43897 325 aaKnown RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ARFIP1P53367 373 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 EMP2P54851 167 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 SRSF6Q13247 344 aaKnown RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 TBR1Q16650 682 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 AP5B1Q2VPB7 878 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MINDY4Q4G0A6 757 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 DEFB134Q4QY38 66 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 LCN10Q6JVE6 187 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 LRIG3Q6UXM1 1119 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MILR1Q7Z6M3 343 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 APLFQ8IW19 511 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 SRRM1Q8IYB3 904 aaKnown RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 LAS2Q8IYD9 372 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ANKRD53Q8N9V6 530 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 KCT2Q8NC54 265 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ZNF740Q8NDX6 193 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 OR2L5Q8NG80 312 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 OR7G3Q8NG95 312 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 OR9A4Q8NGU2 314 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 OR51Q1Q8NH59 317 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 OR2W6PQ8NHA6 318 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MZB1Q8WU39 189 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 EXTL1Q92935 676 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 APOPT1Q96IL0 206 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 TBCDQ9BTW9 1192 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 NTMT1Q9BV86 223 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 C1QTNF3Q9BXJ4 246 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 CENPHQ9H3R5 247 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ELOVL6Q9H5J4 265 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 SOX17Q9H6I2 414 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 NOL11Q9H8H0 719 aaKnown RBP7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MKS1Q9NXB0 559 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 AHSPQ9NZD4 102 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 CTSFQ9UBX1 484 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 LGALS13Q9UHV8 139 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 C3orf18Q9UK00 162 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 TSC22D4Q9Y3Q8 395 aa7.4□□□□□ -1.22
NR1I3-235ENST00000628566 ANKRD12Q6UB98 2062 aa7.4□□□□□ -1.23
NR1I3-235ENST00000628566 SNRNP200O75643 2136 aaKnown RBP7.4□□□□□ -1.23
NR1I3-235ENST00000628566 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 ARHGAP10A1A4S6 786 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 BLACEA4D250 179 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 LRIT2A6NDA9 550 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 IDSB3KWA1 339 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 SGK494L7N484 410 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 AGPSO00116 658 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 FOXE1O00358 373 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 CLDN4O14493 209 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 GALR3O60755 368 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 RDH16O75452 317 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 KRT6AP02538 564 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 STATHP02808 62 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 KRT6BP04259 564 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 ALPPP05187 535 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 UQCRHP07919 91 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 RPS17P08708 135 aaKnown RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 RNH1P13489 461 aaKnown RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 ICAM2P13598 275 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 CPA3P15088 417 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 ACPPP15309 386 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 WT1P19544 449 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 HMOX2P30519 316 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 TLX1P31314 330 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-235ENST00000628566 XCR1P46094 333 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 KRT6CP48668 564 aa7.39□□□□□ -1.23
NR1I3-235ENST00000628566 PLA2G16P53816 162 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms